Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC17.72■□□□□ 0.43
Sned1Q70E20 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC17.72■□□□□ 0.43
Sned1Q70E20 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sned1Q70E20 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC17.72■□□□□ 0.43
Sned1Q70E20 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC17.72■□□□□ 0.43
Sned1Q70E20 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC17.72■□□□□ 0.43
Sned1Q70E20 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Sned1Q70E20 Gm5425-201ENSMUST00000214125 459 ntBASIC17.72■□□□□ 0.43
Sned1Q70E20 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sned1Q70E20 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC17.72■□□□□ 0.43
Sned1Q70E20 AC126253.1-201ENSMUST00000227974 824 ntBASIC17.72■□□□□ 0.43
Sned1Q70E20 Gm7399-201ENSMUST00000032395 858 ntBASIC17.72■□□□□ 0.43
Sned1Q70E20 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sned1Q70E20 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sned1Q70E20 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sned1Q70E20 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sned1Q70E20 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Sned1Q70E20 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sned1Q70E20 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sned1Q70E20 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sned1Q70E20 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sned1Q70E20 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sned1Q70E20 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sned1Q70E20 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.71■□□□□ 0.43
Sned1Q70E20 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sned1Q70E20 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Sned1Q70E20 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sned1Q70E20 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sned1Q70E20 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC17.71■□□□□ 0.43
Sned1Q70E20 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Sned1Q70E20 Gm42442-201ENSMUST00000197951 1133 ntBASIC17.71■□□□□ 0.43
Sned1Q70E20 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC17.71■□□□□ 0.43
Sned1Q70E20 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC17.71■□□□□ 0.43
Sned1Q70E20 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sned1Q70E20 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sned1Q70E20 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.42
Sned1Q70E20 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Sned1Q70E20 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Sned1Q70E20 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sned1Q70E20 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sned1Q70E20 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sned1Q70E20 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sned1Q70E20 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sned1Q70E20 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sned1Q70E20 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sned1Q70E20 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sned1Q70E20 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC17.7■□□□□ 0.42
Sned1Q70E20 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sned1Q70E20 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Sned1Q70E20 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sned1Q70E20 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sned1Q70E20 Gm12928-201ENSMUST00000117115 573 ntBASIC17.7■□□□□ 0.42
Sned1Q70E20 Gm5187-201ENSMUST00000117317 991 ntBASIC17.7■□□□□ 0.42
Sned1Q70E20 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sned1Q70E20 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC17.7■□□□□ 0.42
Sned1Q70E20 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sned1Q70E20 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sned1Q70E20 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC17.7■□□□□ 0.42
Sned1Q70E20 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sned1Q70E20 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sned1Q70E20 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sned1Q70E20 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sned1Q70E20 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Sned1Q70E20 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Sned1Q70E20 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sned1Q70E20 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sned1Q70E20 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Sned1Q70E20 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sned1Q70E20 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sned1Q70E20 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sned1Q70E20 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sned1Q70E20 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sned1Q70E20 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sned1Q70E20 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sned1Q70E20 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Sned1Q70E20 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sned1Q70E20 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC17.69■□□□□ 0.42
Sned1Q70E20 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Sned1Q70E20 Gm4804-201ENSMUST00000182234 999 ntBASIC17.69■□□□□ 0.42
Sned1Q70E20 Gm27847-201ENSMUST00000183711 107 ntBASIC17.69■□□□□ 0.42
Sned1Q70E20 Gm27375-201ENSMUST00000183799 107 ntBASIC17.69■□□□□ 0.42
Sned1Q70E20 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.69■□□□□ 0.42
Sned1Q70E20 Gm19078-201ENSMUST00000206311 727 ntBASIC17.69■□□□□ 0.42
Sned1Q70E20 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sned1Q70E20 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
Sned1Q70E20 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sned1Q70E20 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sned1Q70E20 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sned1Q70E20 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sned1Q70E20 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sned1Q70E20 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sned1Q70E20 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sned1Q70E20 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sned1Q70E20 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Sned1Q70E20 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Sned1Q70E20 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sned1Q70E20 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC17.68■□□□□ 0.42
Sned1Q70E20 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sned1Q70E20 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Sned1Q70E20 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms