Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Snrnp40Q6PE01 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Snrnp40Q6PE01 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.06□□□□□ -0.32
Snrnp40Q6PE01 Gm3436-201ENSMUST00000179930 840 ntBASIC13.06□□□□□ -0.32
Snrnp40Q6PE01 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Snrnp40Q6PE01 Gm9908-201ENSMUST00000211534 448 ntBASIC13.06□□□□□ -0.32
Snrnp40Q6PE01 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.06□□□□□ -0.32
Snrnp40Q6PE01 Dupd1-202ENSMUST00000224735 548 ntBASIC13.06□□□□□ -0.32
Snrnp40Q6PE01 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Snrnp40Q6PE01 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Snrnp40Q6PE01 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Snrnp40Q6PE01 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Snrnp40Q6PE01 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Snrnp40Q6PE01 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Snrnp40Q6PE01 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Snrnp40Q6PE01 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Snrnp40Q6PE01 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Snrnp40Q6PE01 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Snrnp40Q6PE01 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Snrnp40Q6PE01 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Snrnp40Q6PE01 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Snrnp40Q6PE01 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Snrnp40Q6PE01 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Snrnp40Q6PE01 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Gm29310-201ENSMUST00000185468 696 ntBASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Gm21825-201ENSMUST00000185728 696 ntBASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Gm29109-201ENSMUST00000185895 696 ntBASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Gm21896-201ENSMUST00000186520 696 ntBASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Gm21873-201ENSMUST00000186728 696 ntBASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Gm21794-201ENSMUST00000187056 696 ntBASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Gm21880-201ENSMUST00000187275 696 ntBASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Gm21826-201ENSMUST00000187451 696 ntBASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Gm21198-201ENSMUST00000188393 696 ntBASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Gm21749-201ENSMUST00000189343 696 ntBASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Gm21901-201ENSMUST00000189568 696 ntBASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Gm29424-201ENSMUST00000189716 696 ntBASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Gm28599-201ENSMUST00000189838 694 ntBASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Gm21867-201ENSMUST00000189917 696 ntBASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Gm29269-201ENSMUST00000190087 696 ntBASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Gm21722-201ENSMUST00000190153 696 ntBASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Gm28423-201ENSMUST00000190701 696 ntBASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Gm21899-201ENSMUST00000190745 696 ntBASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Gm21910-201ENSMUST00000191163 696 ntBASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Gm21849-201ENSMUST00000191571 696 ntBASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Gm28678-201ENSMUST00000191593 696 ntBASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Gm20910-201ENSMUST00000193268 696 ntBASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Gm21871-201ENSMUST00000194621 696 ntBASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Snrnp40Q6PE01 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 Gm22189-201ENSMUST00000103822 86 ntBASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 Gm6222-201ENSMUST00000120787 396 ntBASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.04□□□□□ -0.32
Snrnp40Q6PE01 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms