Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Smarcc2Q6PDG5 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc2Q6PDG5 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.39■□□□□ 0.37
Smarcc2Q6PDG5 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Smarcc2Q6PDG5 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Smarcc2Q6PDG5 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc2Q6PDG5 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.39■□□□□ 0.37
Smarcc2Q6PDG5 Gm37935-201ENSMUST00000192012 982 ntBASIC17.39■□□□□ 0.37
Smarcc2Q6PDG5 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.39■□□□□ 0.37
Smarcc2Q6PDG5 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc2Q6PDG5 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Smarcc2Q6PDG5 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Smarcc2Q6PDG5 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc2Q6PDG5 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Smarcc2Q6PDG5 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc2Q6PDG5 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc2Q6PDG5 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.39■□□□□ 0.37
Smarcc2Q6PDG5 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc2Q6PDG5 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc2Q6PDG5 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc2Q6PDG5 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc2Q6PDG5 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc2Q6PDG5 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc2Q6PDG5 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc2Q6PDG5 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc2Q6PDG5 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcc2Q6PDG5 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcc2Q6PDG5 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcc2Q6PDG5 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Smarcc2Q6PDG5 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcc2Q6PDG5 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Smarcc2Q6PDG5 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcc2Q6PDG5 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcc2Q6PDG5 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Smarcc2Q6PDG5 Mir3113-201ENSMUST00000175478 76 ntBASIC17.38■□□□□ 0.37
Smarcc2Q6PDG5 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.38■□□□□ 0.37
Smarcc2Q6PDG5 Mir8117-201ENSMUST00000184773 107 ntBASIC17.38■□□□□ 0.37
Smarcc2Q6PDG5 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Smarcc2Q6PDG5 Gm18246-201ENSMUST00000221023 728 ntBASIC17.38■□□□□ 0.37
Smarcc2Q6PDG5 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.38■□□□□ 0.37
Smarcc2Q6PDG5 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Smarcc2Q6PDG5 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcc2Q6PDG5 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcc2Q6PDG5 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcc2Q6PDG5 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcc2Q6PDG5 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.38■□□□□ 0.37
Smarcc2Q6PDG5 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcc2Q6PDG5 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Smarcc2Q6PDG5 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.38■□□□□ 0.37
Smarcc2Q6PDG5 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcc2Q6PDG5 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Smarcc2Q6PDG5 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc2Q6PDG5 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Smarcc2Q6PDG5 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc2Q6PDG5 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc2Q6PDG5 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc2Q6PDG5 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc2Q6PDG5 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
Smarcc2Q6PDG5 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.37■□□□□ 0.37
Smarcc2Q6PDG5 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc2Q6PDG5 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc2Q6PDG5 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Smarcc2Q6PDG5 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc2Q6PDG5 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc2Q6PDG5 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc2Q6PDG5 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.37■□□□□ 0.37
Smarcc2Q6PDG5 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.37■□□□□ 0.37
Smarcc2Q6PDG5 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Smarcc2Q6PDG5 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc2Q6PDG5 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc2Q6PDG5 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc2Q6PDG5 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc2Q6PDG5 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.37■□□□□ 0.37
Smarcc2Q6PDG5 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Smarcc2Q6PDG5 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc2Q6PDG5 Carlr-201ENSMUST00000181515 2574 ntBASIC17.37■□□□□ 0.37
Smarcc2Q6PDG5 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc2Q6PDG5 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc2Q6PDG5 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc2Q6PDG5 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc2Q6PDG5 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcc2Q6PDG5 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcc2Q6PDG5 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcc2Q6PDG5 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcc2Q6PDG5 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcc2Q6PDG5 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcc2Q6PDG5 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.36■□□□□ 0.37
Smarcc2Q6PDG5 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.36■□□□□ 0.37
Smarcc2Q6PDG5 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcc2Q6PDG5 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.36■□□□□ 0.37
Smarcc2Q6PDG5 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcc2Q6PDG5 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcc2Q6PDG5 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Smarcc2Q6PDG5 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcc2Q6PDG5 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.36■□□□□ 0.37
Smarcc2Q6PDG5 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Smarcc2Q6PDG5 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcc2Q6PDG5 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcc2Q6PDG5 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcc2Q6PDG5 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms