Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Casc4Q6P2L7 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Casc4Q6P2L7 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Casc4Q6P2L7 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.12■□□□□ 0.01
Casc4Q6P2L7 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.12■□□□□ 0.01
Casc4Q6P2L7 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.12■□□□□ 0.01
Casc4Q6P2L7 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.12■□□□□ 0.01
Casc4Q6P2L7 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Casc4Q6P2L7 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Casc4Q6P2L7 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.12■□□□□ 0.01
Casc4Q6P2L7 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Casc4Q6P2L7 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.12■□□□□ 0.01
Casc4Q6P2L7 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Casc4Q6P2L7 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Casc4Q6P2L7 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Casc4Q6P2L7 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Casc4Q6P2L7 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Casc4Q6P2L7 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Casc4Q6P2L7 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Casc4Q6P2L7 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Casc4Q6P2L7 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Casc4Q6P2L7 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Casc4Q6P2L7 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Casc4Q6P2L7 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Casc4Q6P2L7 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Casc4Q6P2L7 Gm11779-201ENSMUST00000118541 368 ntBASIC15.11■□□□□ 0.01
Casc4Q6P2L7 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Casc4Q6P2L7 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.11■□□□□ 0.01
Casc4Q6P2L7 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Casc4Q6P2L7 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Casc4Q6P2L7 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Casc4Q6P2L7 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Casc4Q6P2L7 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.11■□□□□ 0.01
Casc4Q6P2L7 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Casc4Q6P2L7 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Casc4Q6P2L7 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Casc4Q6P2L7 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Casc4Q6P2L7 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Casc4Q6P2L7 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Casc4Q6P2L7 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Casc4Q6P2L7 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.11■□□□□ 0.01
Casc4Q6P2L7 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Casc4Q6P2L7 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Casc4Q6P2L7 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.11■□□□□ 0.01
Casc4Q6P2L7 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Casc4Q6P2L7 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Casc4Q6P2L7 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Casc4Q6P2L7 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Casc4Q6P2L7 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Casc4Q6P2L7 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Casc4Q6P2L7 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Casc4Q6P2L7 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Casc4Q6P2L7 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Casc4Q6P2L7 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.1■□□□□ 0.01
Casc4Q6P2L7 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Casc4Q6P2L7 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.1■□□□□ 0.01
Casc4Q6P2L7 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.1■□□□□ 0.01
Casc4Q6P2L7 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Casc4Q6P2L7 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.1■□□□□ 0.01
Casc4Q6P2L7 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Casc4Q6P2L7 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Casc4Q6P2L7 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Casc4Q6P2L7 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Casc4Q6P2L7 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Casc4Q6P2L7 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Casc4Q6P2L7 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Casc4Q6P2L7 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.1■□□□□ 0.01
Casc4Q6P2L7 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Casc4Q6P2L7 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.09■□□□□ 0.01
Casc4Q6P2L7 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Casc4Q6P2L7 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Casc4Q6P2L7 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Casc4Q6P2L7 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Casc4Q6P2L7 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Casc4Q6P2L7 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Casc4Q6P2L7 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Casc4Q6P2L7 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Casc4Q6P2L7 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Casc4Q6P2L7 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Casc4Q6P2L7 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Casc4Q6P2L7 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Casc4Q6P2L7 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.09■□□□□ 0.01
Casc4Q6P2L7 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Casc4Q6P2L7 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Casc4Q6P2L7 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Casc4Q6P2L7 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.09■□□□□ 0.01
Casc4Q6P2L7 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Casc4Q6P2L7 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.09■□□□□ 0.01
Casc4Q6P2L7 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Casc4Q6P2L7 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.09■□□□□ 0.01
Casc4Q6P2L7 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Casc4Q6P2L7 Gm15467-201ENSMUST00000120582 445 ntBASIC15.09■□□□□ 0.01
Casc4Q6P2L7 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.09■□□□□ 0.01
Casc4Q6P2L7 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.09■□□□□ 0.01
Casc4Q6P2L7 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Casc4Q6P2L7 Mir8117-201ENSMUST00000184773 107 ntBASIC15.09■□□□□ 0.01
Casc4Q6P2L7 Gm8000-201ENSMUST00000188378 592 ntBASIC15.09■□□□□ 0.01
Casc4Q6P2L7 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.09■□□□□ 0.01
Casc4Q6P2L7 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Casc4Q6P2L7 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms