Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hdac4Q6NZM9 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hdac4Q6NZM9 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hdac4Q6NZM9 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Hdac4Q6NZM9 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.67■□□□□ 0.26
Hdac4Q6NZM9 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hdac4Q6NZM9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hdac4Q6NZM9 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hdac4Q6NZM9 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.67■□□□□ 0.26
Hdac4Q6NZM9 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Hdac4Q6NZM9 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Hdac4Q6NZM9 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Hdac4Q6NZM9 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.67■□□□□ 0.26
Hdac4Q6NZM9 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hdac4Q6NZM9 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.67■□□□□ 0.26
Hdac4Q6NZM9 Gm12134-201ENSMUST00000122109 520 ntBASIC16.67■□□□□ 0.26
Hdac4Q6NZM9 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.67■□□□□ 0.26
Hdac4Q6NZM9 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.67■□□□□ 0.26
Hdac4Q6NZM9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hdac4Q6NZM9 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hdac4Q6NZM9 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Hdac4Q6NZM9 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hdac4Q6NZM9 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Hdac4Q6NZM9 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hdac4Q6NZM9 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hdac4Q6NZM9 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hdac4Q6NZM9 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hdac4Q6NZM9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hdac4Q6NZM9 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hdac4Q6NZM9 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.67■□□□□ 0.26
Hdac4Q6NZM9 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hdac4Q6NZM9 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hdac4Q6NZM9 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Hdac4Q6NZM9 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hdac4Q6NZM9 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Hdac4Q6NZM9 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hdac4Q6NZM9 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hdac4Q6NZM9 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.66■□□□□ 0.26
Hdac4Q6NZM9 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hdac4Q6NZM9 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hdac4Q6NZM9 Gm16198-201ENSMUST00000118766 670 ntBASIC16.66■□□□□ 0.26
Hdac4Q6NZM9 Gm5177-201ENSMUST00000183092 997 ntBASIC16.66■□□□□ 0.26
Hdac4Q6NZM9 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hdac4Q6NZM9 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Hdac4Q6NZM9 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hdac4Q6NZM9 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hdac4Q6NZM9 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Hdac4Q6NZM9 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hdac4Q6NZM9 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hdac4Q6NZM9 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hdac4Q6NZM9 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.66■□□□□ 0.26
Hdac4Q6NZM9 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hdac4Q6NZM9 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hdac4Q6NZM9 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hdac4Q6NZM9 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Hdac4Q6NZM9 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hdac4Q6NZM9 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hdac4Q6NZM9 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hdac4Q6NZM9 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hdac4Q6NZM9 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hdac4Q6NZM9 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hdac4Q6NZM9 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hdac4Q6NZM9 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hdac4Q6NZM9 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hdac4Q6NZM9 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hdac4Q6NZM9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Hdac4Q6NZM9 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hdac4Q6NZM9 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.65■□□□□ 0.26
Hdac4Q6NZM9 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Hdac4Q6NZM9 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.65■□□□□ 0.26
Hdac4Q6NZM9 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hdac4Q6NZM9 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.65■□□□□ 0.26
Hdac4Q6NZM9 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.65■□□□□ 0.26
Hdac4Q6NZM9 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.65■□□□□ 0.26
Hdac4Q6NZM9 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hdac4Q6NZM9 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hdac4Q6NZM9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hdac4Q6NZM9 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Hdac4Q6NZM9 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.65■□□□□ 0.26
Hdac4Q6NZM9 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hdac4Q6NZM9 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hdac4Q6NZM9 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Hdac4Q6NZM9 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hdac4Q6NZM9 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hdac4Q6NZM9 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hdac4Q6NZM9 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac4Q6NZM9 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Hdac4Q6NZM9 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac4Q6NZM9 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Hdac4Q6NZM9 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac4Q6NZM9 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac4Q6NZM9 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac4Q6NZM9 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Hdac4Q6NZM9 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Hdac4Q6NZM9 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac4Q6NZM9 Gm23547-201ENSMUST00000158210 271 ntBASIC16.64■□□□□ 0.25
Hdac4Q6NZM9 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.64■□□□□ 0.25
Hdac4Q6NZM9 Thap2-203ENSMUST00000218989 527 ntBASIC16.64■□□□□ 0.25
Hdac4Q6NZM9 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac4Q6NZM9 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms