Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 AC139580.1-202ENSMUST00000223574 928 ntBASIC17.29■□□□□ 0.36
Scn9aQ62205 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn9aQ62205 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Scn9aQ62205 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn9aQ62205 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn9aQ62205 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn9aQ62205 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn9aQ62205 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn9aQ62205 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn9aQ62205 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn9aQ62205 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn9aQ62205 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn9aQ62205 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scn9aQ62205 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn9aQ62205 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn9aQ62205 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn9aQ62205 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC17.29■□□□□ 0.36
Scn9aQ62205 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Scn9aQ62205 Gm9257-201ENSMUST00000221254 232 ntBASIC17.29■□□□□ 0.36
Scn9aQ62205 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn9aQ62205 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn9aQ62205 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scn9aQ62205 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn9aQ62205 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn9aQ62205 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn9aQ62205 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scn9aQ62205 Gm6244-201ENSMUST00000178732 841 ntBASIC17.28■□□□□ 0.36
Scn9aQ62205 Gm9726-201ENSMUST00000180321 678 ntBASIC17.28■□□□□ 0.36
Scn9aQ62205 Gm37424-201ENSMUST00000191727 561 ntBASIC17.28■□□□□ 0.36
Scn9aQ62205 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn9aQ62205 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn9aQ62205 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.28■□□□□ 0.36
Scn9aQ62205 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn9aQ62205 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn9aQ62205 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.28■□□□□ 0.36
Scn9aQ62205 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn9aQ62205 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn9aQ62205 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scn9aQ62205 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Scn9aQ62205 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC17.28■□□□□ 0.36
Scn9aQ62205 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scn9aQ62205 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scn9aQ62205 Gm10478-201ENSMUST00000084451 396 ntBASIC17.28■□□□□ 0.36
Scn9aQ62205 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn9aQ62205 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn9aQ62205 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn9aQ62205 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn9aQ62205 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn9aQ62205 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.27■□□□□ 0.36
Scn9aQ62205 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Scn9aQ62205 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Scn9aQ62205 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn9aQ62205 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
Scn9aQ62205 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Scn9aQ62205 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC17.27■□□□□ 0.36
Scn9aQ62205 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Scn9aQ62205 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn9aQ62205 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn9aQ62205 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Scn9aQ62205 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC17.27■□□□□ 0.36
Scn9aQ62205 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC17.27■□□□□ 0.36
Scn9aQ62205 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn9aQ62205 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC17.27■□□□□ 0.36
Scn9aQ62205 Gm44799-201ENSMUST00000207639 1202 ntBASIC17.27■□□□□ 0.36
Scn9aQ62205 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC17.27■□□□□ 0.36
Scn9aQ62205 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC17.27■□□□□ 0.36
Scn9aQ62205 AC150560.1-201ENSMUST00000227731 1187 ntBASIC17.27■□□□□ 0.36
Scn9aQ62205 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.27■□□□□ 0.35
Scn9aQ62205 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scn9aQ62205 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scn9aQ62205 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.27■□□□□ 0.35
Scn9aQ62205 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scn9aQ62205 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Scn9aQ62205 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn9aQ62205 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scn9aQ62205 Mir692-1-201ENSMUST00000102263 109 ntBASIC17.26■□□□□ 0.35
Scn9aQ62205 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn9aQ62205 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC17.26■□□□□ 0.35
Scn9aQ62205 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC17.26■□□□□ 0.35
Scn9aQ62205 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn9aQ62205 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scn9aQ62205 Gm2495-201ENSMUST00000191160 466 ntBASIC17.26■□□□□ 0.35
Scn9aQ62205 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn9aQ62205 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scn9aQ62205 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC17.26■□□□□ 0.35
Scn9aQ62205 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scn9aQ62205 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn9aQ62205 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Scn9aQ62205 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scn9aQ62205 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn9aQ62205 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn9aQ62205 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn9aQ62205 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn9aQ62205 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn9aQ62205 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn9aQ62205 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn9aQ62205 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC17.26■□□□□ 0.35
Scn9aQ62205 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Scn9aQ62205 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC17.26■□□□□ 0.35
Scn9aQ62205 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms