Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccne1Q61457 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccne1Q61457 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccne1Q61457 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccne1Q61457 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccne1Q61457 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccne1Q61457 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccne1Q61457 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccne1Q61457 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccne1Q61457 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccne1Q61457 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccne1Q61457 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC19.31■□□□□ 0.68
Ccne1Q61457 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccne1Q61457 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccne1Q61457 Gm6263-201ENSMUST00000120029 1342 ntBASIC19.31■□□□□ 0.68
Ccne1Q61457 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccne1Q61457 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccne1Q61457 Gm3365-201ENSMUST00000216296 1480 ntBASIC19.31■□□□□ 0.68
Ccne1Q61457 Gm27528-202ENSMUST00000222916 2012 ntBASIC19.31■□□□□ 0.68
Ccne1Q61457 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccne1Q61457 Gm4204-201ENSMUST00000110798 1231 ntBASIC19.31■□□□□ 0.68
Ccne1Q61457 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Ccne1Q61457 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Ccne1Q61457 Gm6944-201ENSMUST00000182449 1006 ntBASIC19.31■□□□□ 0.68
Ccne1Q61457 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccne1Q61457 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccne1Q61457 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccne1Q61457 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccne1Q61457 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Ccne1Q61457 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccne1Q61457 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Ccne1Q61457 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC19.3■□□□□ 0.68
Ccne1Q61457 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccne1Q61457 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Ccne1Q61457 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC19.3■□□□□ 0.68
Ccne1Q61457 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccne1Q61457 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccne1Q61457 Gm29667-201ENSMUST00000190817 490 ntBASIC19.3■□□□□ 0.68
Ccne1Q61457 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccne1Q61457 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC19.3■□□□□ 0.68
Ccne1Q61457 Gm43703-201ENSMUST00000200523 763 ntBASIC19.3■□□□□ 0.68
Ccne1Q61457 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccne1Q61457 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Ccne1Q61457 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC19.3■□□□□ 0.68
Ccne1Q61457 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccne1Q61457 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccne1Q61457 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccne1Q61457 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccne1Q61457 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccne1Q61457 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccne1Q61457 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccne1Q61457 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccne1Q61457 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC19.29■□□□□ 0.68
Ccne1Q61457 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC19.29■□□□□ 0.68
Ccne1Q61457 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC19.29■□□□□ 0.68
Ccne1Q61457 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccne1Q61457 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccne1Q61457 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccne1Q61457 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ccne1Q61457 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccne1Q61457 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccne1Q61457 Gm16476-201ENSMUST00000221544 139 ntBASIC19.29■□□□□ 0.68
Ccne1Q61457 Dupd1-202ENSMUST00000224735 548 ntBASIC19.29■□□□□ 0.68
Ccne1Q61457 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccne1Q61457 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccne1Q61457 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccne1Q61457 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccne1Q61457 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccne1Q61457 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC19.29■□□□□ 0.68
Ccne1Q61457 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccne1Q61457 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccne1Q61457 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccne1Q61457 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccne1Q61457 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC19.29■□□□□ 0.68
Ccne1Q61457 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccne1Q61457 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccne1Q61457 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
Ccne1Q61457 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccne1Q61457 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ccne1Q61457 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccne1Q61457 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccne1Q61457 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccne1Q61457 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccne1Q61457 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccne1Q61457 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccne1Q61457 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccne1Q61457 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccne1Q61457 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccne1Q61457 AC133083.1-201ENSMUST00000221736 2209 ntBASIC19.28■□□□□ 0.68
Ccne1Q61457 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccne1Q61457 Trav13-3-201ENSMUST00000117226 336 ntBASIC19.28■□□□□ 0.68
Ccne1Q61457 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC19.28■□□□□ 0.68
Ccne1Q61457 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC19.28■□□□□ 0.68
Ccne1Q61457 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC19.28■□□□□ 0.68
Ccne1Q61457 Gm24694-201ENSMUST00000180054 110 ntBASIC19.28■□□□□ 0.68
Ccne1Q61457 Gm27631-201ENSMUST00000184163 466 ntBASIC19.28■□□□□ 0.68
Ccne1Q61457 Gm27663-201ENSMUST00000184839 110 ntBASIC19.28■□□□□ 0.68
Ccne1Q61457 Gm46209-201ENSMUST00000217912 553 ntBASIC19.28■□□□□ 0.68
Ccne1Q61457 Gm6218-201ENSMUST00000219812 628 ntBASIC19.28■□□□□ 0.68
Ccne1Q61457 AC149588.3-201ENSMUST00000227515 150 ntBASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms