Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ift88Q61371 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ift88Q61371 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ift88Q61371 Gm10355-201ENSMUST00000097146 517 ntBASIC16.53■□□□□ 0.24
Ift88Q61371 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.53■□□□□ 0.24
Ift88Q61371 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ift88Q61371 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ift88Q61371 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ift88Q61371 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ift88Q61371 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ift88Q61371 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ift88Q61371 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ift88Q61371 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ift88Q61371 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ift88Q61371 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ift88Q61371 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.52■□□□□ 0.24
Ift88Q61371 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ift88Q61371 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ift88Q61371 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.52■□□□□ 0.24
Ift88Q61371 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ift88Q61371 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ift88Q61371 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ift88Q61371 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ift88Q61371 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ift88Q61371 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Ift88Q61371 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Ift88Q61371 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ift88Q61371 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ift88Q61371 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ift88Q61371 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ift88Q61371 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ift88Q61371 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.51■□□□□ 0.23
Ift88Q61371 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ift88Q61371 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ift88Q61371 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ift88Q61371 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ift88Q61371 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ift88Q61371 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ift88Q61371 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ift88Q61371 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ift88Q61371 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ift88Q61371 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ift88Q61371 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ift88Q61371 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ift88Q61371 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ift88Q61371 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ift88Q61371 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ift88Q61371 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Ift88Q61371 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ift88Q61371 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ift88Q61371 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ift88Q61371 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ift88Q61371 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ift88Q61371 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ift88Q61371 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ift88Q61371 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.51■□□□□ 0.23
Ift88Q61371 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.51■□□□□ 0.23
Ift88Q61371 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ift88Q61371 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ift88Q61371 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ift88Q61371 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.5■□□□□ 0.23
Ift88Q61371 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ift88Q61371 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ift88Q61371 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ift88Q61371 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.5■□□□□ 0.23
Ift88Q61371 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ift88Q61371 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ift88Q61371 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ift88Q61371 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.5■□□□□ 0.23
Ift88Q61371 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ift88Q61371 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ift88Q61371 Gm18489-201ENSMUST00000172565 551 ntBASIC16.5■□□□□ 0.23
Ift88Q61371 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Ift88Q61371 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
Ift88Q61371 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Ift88Q61371 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.5■□□□□ 0.23
Ift88Q61371 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ift88Q61371 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.5■□□□□ 0.23
Ift88Q61371 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
Ift88Q61371 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.5■□□□□ 0.23
Ift88Q61371 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Ift88Q61371 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ift88Q61371 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ift88Q61371 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ift88Q61371 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.5■□□□□ 0.23
Ift88Q61371 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ift88Q61371 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ift88Q61371 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ift88Q61371 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ift88Q61371 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ift88Q61371 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.49■□□□□ 0.23
Ift88Q61371 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ift88Q61371 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ift88Q61371 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ift88Q61371 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ift88Q61371 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ift88Q61371 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ift88Q61371 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.49■□□□□ 0.23
Ift88Q61371 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Ift88Q61371 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms