Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scnn1aQ61180 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Scnn1aQ61180 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scnn1aQ61180 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scnn1aQ61180 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scnn1aQ61180 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scnn1aQ61180 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scnn1aQ61180 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Scnn1aQ61180 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Scnn1aQ61180 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Scnn1aQ61180 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.09■□□□□ 0.33
Scnn1aQ61180 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scnn1aQ61180 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scnn1aQ61180 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.09■□□□□ 0.33
Scnn1aQ61180 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scnn1aQ61180 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.09■□□□□ 0.33
Scnn1aQ61180 Gm9719-201ENSMUST00000162765 543 ntBASIC17.09■□□□□ 0.33
Scnn1aQ61180 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.09■□□□□ 0.33
Scnn1aQ61180 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scnn1aQ61180 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scnn1aQ61180 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Scnn1aQ61180 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC17.09■□□□□ 0.33
Scnn1aQ61180 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scnn1aQ61180 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scnn1aQ61180 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scnn1aQ61180 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scnn1aQ61180 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.09■□□□□ 0.33
Scnn1aQ61180 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Scnn1aQ61180 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.09■□□□□ 0.33
Scnn1aQ61180 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Scnn1aQ61180 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scnn1aQ61180 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scnn1aQ61180 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scnn1aQ61180 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scnn1aQ61180 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scnn1aQ61180 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Scnn1aQ61180 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.08■□□□□ 0.33
Scnn1aQ61180 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scnn1aQ61180 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scnn1aQ61180 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scnn1aQ61180 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scnn1aQ61180 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scnn1aQ61180 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scnn1aQ61180 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Scnn1aQ61180 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
Scnn1aQ61180 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scnn1aQ61180 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scnn1aQ61180 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.08■□□□□ 0.32
Scnn1aQ61180 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Scnn1aQ61180 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Scnn1aQ61180 Gm9182-201ENSMUST00000217829 639 ntBASIC17.08■□□□□ 0.32
Scnn1aQ61180 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Scnn1aQ61180 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scnn1aQ61180 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scnn1aQ61180 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scnn1aQ61180 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Scnn1aQ61180 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Scnn1aQ61180 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.08■□□□□ 0.32
Scnn1aQ61180 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scnn1aQ61180 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scnn1aQ61180 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scnn1aQ61180 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Scnn1aQ61180 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scnn1aQ61180 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scnn1aQ61180 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Scnn1aQ61180 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scnn1aQ61180 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scnn1aQ61180 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scnn1aQ61180 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scnn1aQ61180 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scnn1aQ61180 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scnn1aQ61180 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Scnn1aQ61180 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scnn1aQ61180 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC17.07■□□□□ 0.32
Scnn1aQ61180 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC17.07■□□□□ 0.32
Scnn1aQ61180 Gm5566-201ENSMUST00000116118 459 ntBASIC17.07■□□□□ 0.32
Scnn1aQ61180 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC17.07■□□□□ 0.32
Scnn1aQ61180 Gm9726-201ENSMUST00000180321 678 ntBASIC17.07■□□□□ 0.32
Scnn1aQ61180 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scnn1aQ61180 Gm27533-201ENSMUST00000183800 152 ntBASIC17.07■□□□□ 0.32
Scnn1aQ61180 Gm27680-201ENSMUST00000184192 160 ntBASIC17.07■□□□□ 0.32
Scnn1aQ61180 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scnn1aQ61180 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scnn1aQ61180 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scnn1aQ61180 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC17.07■□□□□ 0.32
Scnn1aQ61180 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scnn1aQ61180 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.07■□□□□ 0.32
Scnn1aQ61180 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scnn1aQ61180 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scnn1aQ61180 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scnn1aQ61180 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scnn1aQ61180 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scnn1aQ61180 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scnn1aQ61180 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Scnn1aQ61180 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scnn1aQ61180 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scnn1aQ61180 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scnn1aQ61180 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scnn1aQ61180 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Scnn1aQ61180 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms