Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ClpbQ60649 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClpbQ60649 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ClpbQ60649 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClpbQ60649 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.33□□□□□ -0.12
ClpbQ60649 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.33□□□□□ -0.12
ClpbQ60649 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ClpbQ60649 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ClpbQ60649 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.33□□□□□ -0.12
ClpbQ60649 Gm27300-201ENSMUST00000184085 97 ntBASIC14.33□□□□□ -0.12
ClpbQ60649 Gm27335-201ENSMUST00000184758 97 ntBASIC14.33□□□□□ -0.12
ClpbQ60649 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ClpbQ60649 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClpbQ60649 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClpbQ60649 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClpbQ60649 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.33□□□□□ -0.12
ClpbQ60649 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ClpbQ60649 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClpbQ60649 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
ClpbQ60649 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClpbQ60649 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ClpbQ60649 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ClpbQ60649 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ClpbQ60649 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ClpbQ60649 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ClpbQ60649 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ClpbQ60649 Gm14494-201ENSMUST00000118786 435 ntBASIC14.32□□□□□ -0.12
ClpbQ60649 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ClpbQ60649 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.32□□□□□ -0.12
ClpbQ60649 Mir8117-201ENSMUST00000184773 107 ntBASIC14.32□□□□□ -0.12
ClpbQ60649 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.32□□□□□ -0.12
ClpbQ60649 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ClpbQ60649 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ClpbQ60649 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ClpbQ60649 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ClpbQ60649 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ClpbQ60649 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.32□□□□□ -0.12
ClpbQ60649 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ClpbQ60649 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ClpbQ60649 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ClpbQ60649 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ClpbQ60649 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.32□□□□□ -0.12
ClpbQ60649 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
ClpbQ60649 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ClpbQ60649 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ClpbQ60649 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ClpbQ60649 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ClpbQ60649 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ClpbQ60649 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClpbQ60649 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClpbQ60649 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClpbQ60649 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.31□□□□□ -0.12
ClpbQ60649 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClpbQ60649 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClpbQ60649 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClpbQ60649 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.31□□□□□ -0.12
ClpbQ60649 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
ClpbQ60649 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.31□□□□□ -0.12
ClpbQ60649 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClpbQ60649 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClpbQ60649 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClpbQ60649 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
ClpbQ60649 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ClpbQ60649 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.31□□□□□ -0.12
ClpbQ60649 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.31□□□□□ -0.12
ClpbQ60649 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.31□□□□□ -0.12
ClpbQ60649 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.31□□□□□ -0.12
ClpbQ60649 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClpbQ60649 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
ClpbQ60649 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClpbQ60649 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClpbQ60649 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.31□□□□□ -0.12
ClpbQ60649 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.31□□□□□ -0.12
ClpbQ60649 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClpbQ60649 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClpbQ60649 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClpbQ60649 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClpbQ60649 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.31□□□□□ -0.12
ClpbQ60649 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClpbQ60649 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
ClpbQ60649 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClpbQ60649 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ClpbQ60649 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClpbQ60649 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClpbQ60649 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClpbQ60649 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClpbQ60649 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClpbQ60649 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClpbQ60649 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
ClpbQ60649 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClpbQ60649 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClpbQ60649 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ClpbQ60649 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClpbQ60649 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClpbQ60649 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.3□□□□□ -0.12
ClpbQ60649 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClpbQ60649 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClpbQ60649 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.3□□□□□ -0.12
ClpbQ60649 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ClpbQ60649 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms