Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scaf1Q5U4C3 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Scaf1Q5U4C3 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scaf1Q5U4C3 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC19.37■□□□□ 0.69
Scaf1Q5U4C3 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scaf1Q5U4C3 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scaf1Q5U4C3 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scaf1Q5U4C3 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC19.37■□□□□ 0.69
Scaf1Q5U4C3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scaf1Q5U4C3 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Scaf1Q5U4C3 Gm45751-201ENSMUST00000210185 1573 ntBASIC19.36■□□□□ 0.69
Scaf1Q5U4C3 Syt7-205ENSMUST00000224135 1557 ntBASIC19.36■□□□□ 0.69
Scaf1Q5U4C3 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scaf1Q5U4C3 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Scaf1Q5U4C3 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Scaf1Q5U4C3 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scaf1Q5U4C3 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scaf1Q5U4C3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scaf1Q5U4C3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scaf1Q5U4C3 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scaf1Q5U4C3 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scaf1Q5U4C3 Gm6263-201ENSMUST00000120029 1342 ntBASIC19.36■□□□□ 0.69
Scaf1Q5U4C3 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scaf1Q5U4C3 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC19.36■□□□□ 0.69
Scaf1Q5U4C3 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scaf1Q5U4C3 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scaf1Q5U4C3 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Scaf1Q5U4C3 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC19.36■□□□□ 0.69
Scaf1Q5U4C3 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC19.36■□□□□ 0.69
Scaf1Q5U4C3 Gm44855-201ENSMUST00000205725 362 ntBASIC19.36■□□□□ 0.69
Scaf1Q5U4C3 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scaf1Q5U4C3 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC19.36■□□□□ 0.69
Scaf1Q5U4C3 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Scaf1Q5U4C3 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Scaf1Q5U4C3 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scaf1Q5U4C3 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Scaf1Q5U4C3 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scaf1Q5U4C3 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scaf1Q5U4C3 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scaf1Q5U4C3 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC19.35■□□□□ 0.69
Scaf1Q5U4C3 AC149588.3-201ENSMUST00000227515 150 ntBASIC19.35■□□□□ 0.69
Scaf1Q5U4C3 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Scaf1Q5U4C3 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Scaf1Q5U4C3 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scaf1Q5U4C3 App-207ENSMUST00000227737 2827 ntBASIC19.35■□□□□ 0.69
Scaf1Q5U4C3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scaf1Q5U4C3 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scaf1Q5U4C3 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Scaf1Q5U4C3 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scaf1Q5U4C3 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scaf1Q5U4C3 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC19.34■□□□□ 0.69
Scaf1Q5U4C3 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scaf1Q5U4C3 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scaf1Q5U4C3 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scaf1Q5U4C3 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Scaf1Q5U4C3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scaf1Q5U4C3 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scaf1Q5U4C3 Gm12585-201ENSMUST00000117307 290 ntBASIC19.34■□□□□ 0.69
Scaf1Q5U4C3 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scaf1Q5U4C3 Gm21854-201ENSMUST00000179901 471 ntBASIC19.34■□□□□ 0.69
Scaf1Q5U4C3 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scaf1Q5U4C3 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scaf1Q5U4C3 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Scaf1Q5U4C3 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scaf1Q5U4C3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scaf1Q5U4C3 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scaf1Q5U4C3 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC19.34■□□□□ 0.69
Scaf1Q5U4C3 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scaf1Q5U4C3 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Scaf1Q5U4C3 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scaf1Q5U4C3 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Scaf1Q5U4C3 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scaf1Q5U4C3 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Scaf1Q5U4C3 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scaf1Q5U4C3 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scaf1Q5U4C3 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scaf1Q5U4C3 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scaf1Q5U4C3 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Scaf1Q5U4C3 Ighv5-13-201ENSMUST00000193550 290 ntBASIC19.33■□□□□ 0.68
Scaf1Q5U4C3 Gm45195-201ENSMUST00000205597 1008 ntBASIC19.33■□□□□ 0.68
Scaf1Q5U4C3 Gm20445-201ENSMUST00000061905 565 ntBASIC19.33■□□□□ 0.68
Scaf1Q5U4C3 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scaf1Q5U4C3 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scaf1Q5U4C3 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scaf1Q5U4C3 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scaf1Q5U4C3 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scaf1Q5U4C3 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scaf1Q5U4C3 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scaf1Q5U4C3 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Scaf1Q5U4C3 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC19.33■□□□□ 0.68
Scaf1Q5U4C3 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scaf1Q5U4C3 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scaf1Q5U4C3 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Scaf1Q5U4C3 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scaf1Q5U4C3 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scaf1Q5U4C3 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Scaf1Q5U4C3 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scaf1Q5U4C3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scaf1Q5U4C3 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Scaf1Q5U4C3 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms