Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Shroom1Q5SX79 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Shroom1Q5SX79 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Shroom1Q5SX79 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Shroom1Q5SX79 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.88■□□□□ 0.13
Shroom1Q5SX79 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.88■□□□□ 0.13
Shroom1Q5SX79 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.88■□□□□ 0.13
Shroom1Q5SX79 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Shroom1Q5SX79 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.88■□□□□ 0.13
Shroom1Q5SX79 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.88■□□□□ 0.13
Shroom1Q5SX79 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.88■□□□□ 0.13
Shroom1Q5SX79 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Shroom1Q5SX79 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Shroom1Q5SX79 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.88■□□□□ 0.13
Shroom1Q5SX79 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Shroom1Q5SX79 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Shroom1Q5SX79 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Shroom1Q5SX79 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Shroom1Q5SX79 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Shroom1Q5SX79 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Shroom1Q5SX79 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Shroom1Q5SX79 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Shroom1Q5SX79 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.87■□□□□ 0.13
Shroom1Q5SX79 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Shroom1Q5SX79 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Shroom1Q5SX79 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Shroom1Q5SX79 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Shroom1Q5SX79 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Shroom1Q5SX79 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Shroom1Q5SX79 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.87■□□□□ 0.13
Shroom1Q5SX79 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Shroom1Q5SX79 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Shroom1Q5SX79 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Shroom1Q5SX79 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.87■□□□□ 0.13
Shroom1Q5SX79 Gm10253-201ENSMUST00000194270 940 ntBASIC15.87■□□□□ 0.13
Shroom1Q5SX79 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.87■□□□□ 0.13
Shroom1Q5SX79 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.87■□□□□ 0.13
Shroom1Q5SX79 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.87■□□□□ 0.13
Shroom1Q5SX79 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Shroom1Q5SX79 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Shroom1Q5SX79 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Shroom1Q5SX79 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Shroom1Q5SX79 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.87■□□□□ 0.13
Shroom1Q5SX79 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Shroom1Q5SX79 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Shroom1Q5SX79 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Shroom1Q5SX79 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Shroom1Q5SX79 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Shroom1Q5SX79 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Shroom1Q5SX79 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Shroom1Q5SX79 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.87■□□□□ 0.13
Shroom1Q5SX79 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Shroom1Q5SX79 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Shroom1Q5SX79 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Shroom1Q5SX79 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.86■□□□□ 0.13
Shroom1Q5SX79 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Shroom1Q5SX79 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Shroom1Q5SX79 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.86■□□□□ 0.13
Shroom1Q5SX79 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Shroom1Q5SX79 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Shroom1Q5SX79 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Shroom1Q5SX79 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Shroom1Q5SX79 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Shroom1Q5SX79 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Shroom1Q5SX79 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Shroom1Q5SX79 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Shroom1Q5SX79 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Shroom1Q5SX79 Gm18737-201ENSMUST00000173594 937 ntBASIC15.86■□□□□ 0.13
Shroom1Q5SX79 Mir7023-201ENSMUST00000185093 64 ntBASIC15.86■□□□□ 0.13
Shroom1Q5SX79 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.86■□□□□ 0.13
Shroom1Q5SX79 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Shroom1Q5SX79 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Shroom1Q5SX79 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Shroom1Q5SX79 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Shroom1Q5SX79 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Shroom1Q5SX79 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Shroom1Q5SX79 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shroom1Q5SX79 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Shroom1Q5SX79 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shroom1Q5SX79 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shroom1Q5SX79 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.85■□□□□ 0.13
Shroom1Q5SX79 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Shroom1Q5SX79 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shroom1Q5SX79 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Shroom1Q5SX79 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shroom1Q5SX79 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.85■□□□□ 0.13
Shroom1Q5SX79 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shroom1Q5SX79 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shroom1Q5SX79 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shroom1Q5SX79 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Shroom1Q5SX79 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.85■□□□□ 0.13
Shroom1Q5SX79 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shroom1Q5SX79 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shroom1Q5SX79 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shroom1Q5SX79 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shroom1Q5SX79 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Shroom1Q5SX79 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shroom1Q5SX79 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shroom1Q5SX79 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shroom1Q5SX79 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms