Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6d-4Q5R1I0 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Trav6d-4Q5R1I0 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6d-4Q5R1I0 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6d-4Q5R1I0 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6d-4Q5R1I0 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6d-4Q5R1I0 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.52□□□□□ -0.4
Trav6d-4Q5R1I0 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6d-4Q5R1I0 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav6d-4Q5R1I0 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-4Q5R1I0 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-4Q5R1I0 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.52□□□□□ -0.41
Trav6d-4Q5R1I0 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Trav6d-4Q5R1I0 Gm18889-201ENSMUST00000174284 929 ntBASIC12.52□□□□□ -0.41
Trav6d-4Q5R1I0 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.52□□□□□ -0.41
Trav6d-4Q5R1I0 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.52□□□□□ -0.41
Trav6d-4Q5R1I0 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.52□□□□□ -0.41
Trav6d-4Q5R1I0 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-4Q5R1I0 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trav6d-4Q5R1I0 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-4Q5R1I0 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav6d-4Q5R1I0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-4Q5R1I0 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-4Q5R1I0 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-4Q5R1I0 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-4Q5R1I0 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-4Q5R1I0 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-4Q5R1I0 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-4Q5R1I0 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Trav6d-4Q5R1I0 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-4Q5R1I0 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Trav6d-4Q5R1I0 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-4Q5R1I0 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trav6d-4Q5R1I0 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Gm6973-201ENSMUST00000117080 721 ntBASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Mir6990-201ENSMUST00000183724 91 ntBASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Gm8396-201ENSMUST00000057361 823 ntBASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-4Q5R1I0 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Gm11543-201ENSMUST00000120758 370 ntBASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.5□□□□□ -0.41
Trav6d-4Q5R1I0 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms