Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav8d-1Q5R1H8 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Trav8d-1Q5R1H8 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8d-1Q5R1H8 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8d-1Q5R1H8 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.24□□□□□ -0.45
Trav8d-1Q5R1H8 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Trav8d-1Q5R1H8 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8d-1Q5R1H8 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8d-1Q5R1H8 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav8d-1Q5R1H8 Olfr129-201ENSMUST00000122318 993 ntBASIC12.24□□□□□ -0.45
Trav8d-1Q5R1H8 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8d-1Q5R1H8 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8d-1Q5R1H8 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
Trav8d-1Q5R1H8 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trav8d-1Q5R1H8 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.24□□□□□ -0.45
Trav8d-1Q5R1H8 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8d-1Q5R1H8 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8d-1Q5R1H8 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.24□□□□□ -0.45
Trav8d-1Q5R1H8 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8d-1Q5R1H8 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8d-1Q5R1H8 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8d-1Q5R1H8 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8d-1Q5R1H8 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8d-1Q5R1H8 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8d-1Q5R1H8 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trav8d-1Q5R1H8 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms