Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 Gm13612-201ENSMUST00000119276 390 ntBASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col27a1Q5QNQ9 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col27a1Q5QNQ9 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col27a1Q5QNQ9 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.12□□□□□ -0.15
Col27a1Q5QNQ9 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.12□□□□□ -0.15
Col27a1Q5QNQ9 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col27a1Q5QNQ9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col27a1Q5QNQ9 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col27a1Q5QNQ9 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.12□□□□□ -0.15
Col27a1Q5QNQ9 Gm4804-201ENSMUST00000182234 999 ntBASIC14.12□□□□□ -0.15
Col27a1Q5QNQ9 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col27a1Q5QNQ9 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.12□□□□□ -0.15
Col27a1Q5QNQ9 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col27a1Q5QNQ9 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col27a1Q5QNQ9 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col27a1Q5QNQ9 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col27a1Q5QNQ9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col27a1Q5QNQ9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col27a1Q5QNQ9 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col27a1Q5QNQ9 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col27a1Q5QNQ9 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Gm3961-201ENSMUST00000204425 994 ntBASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Gm40466-201ENSMUST00000212174 422 ntBASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Gm27847-201ENSMUST00000183711 107 ntBASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Gm27375-201ENSMUST00000183799 107 ntBASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Gm21470-201ENSMUST00000187680 696 ntBASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Gm3786-201ENSMUST00000202659 378 ntBASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Gm6013-201ENSMUST00000212264 699 ntBASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col27a1Q5QNQ9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col27a1Q5QNQ9 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col27a1Q5QNQ9 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Col27a1Q5QNQ9 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col27a1Q5QNQ9 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Col27a1Q5QNQ9 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col27a1Q5QNQ9 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col27a1Q5QNQ9 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col27a1Q5QNQ9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Col27a1Q5QNQ9 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col27a1Q5QNQ9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col27a1Q5QNQ9 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col27a1Q5QNQ9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col27a1Q5QNQ9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col27a1Q5QNQ9 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col27a1Q5QNQ9 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.1□□□□□ -0.15
Col27a1Q5QNQ9 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col27a1Q5QNQ9 Gm8749-201ENSMUST00000117737 331 ntBASIC14.1□□□□□ -0.15
Col27a1Q5QNQ9 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC14.1□□□□□ -0.15
Col27a1Q5QNQ9 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.1□□□□□ -0.15
Col27a1Q5QNQ9 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col27a1Q5QNQ9 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms