Protein–RNA interactions for Protein: Q5ND28

Scarf1, Scavenger receptor class F member 1, mousemouse

Predictions only

Length 820 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarf1Q5ND28 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.35■□□□□ 0.21
Scarf1Q5ND28 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.35■□□□□ 0.21
Scarf1Q5ND28 Gm2756-201ENSMUST00000195851 400 ntBASIC16.35■□□□□ 0.21
Scarf1Q5ND28 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.35■□□□□ 0.21
Scarf1Q5ND28 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scarf1Q5ND28 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Scarf1Q5ND28 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
Scarf1Q5ND28 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scarf1Q5ND28 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.35■□□□□ 0.21
Scarf1Q5ND28 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.35■□□□□ 0.21
Scarf1Q5ND28 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.35■□□□□ 0.21
Scarf1Q5ND28 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scarf1Q5ND28 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scarf1Q5ND28 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scarf1Q5ND28 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Scarf1Q5ND28 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scarf1Q5ND28 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scarf1Q5ND28 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Scarf1Q5ND28 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Scarf1Q5ND28 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.34■□□□□ 0.21
Scarf1Q5ND28 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scarf1Q5ND28 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.34■□□□□ 0.21
Scarf1Q5ND28 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scarf1Q5ND28 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scarf1Q5ND28 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scarf1Q5ND28 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scarf1Q5ND28 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scarf1Q5ND28 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scarf1Q5ND28 Gm13365-201ENSMUST00000121188 973 ntBASIC16.34■□□□□ 0.21
Scarf1Q5ND28 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Scarf1Q5ND28 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC16.34■□□□□ 0.21
Scarf1Q5ND28 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Scarf1Q5ND28 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Scarf1Q5ND28 Gm27494-201ENSMUST00000184735 189 ntBASIC16.34■□□□□ 0.21
Scarf1Q5ND28 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.34■□□□□ 0.21
Scarf1Q5ND28 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.34■□□□□ 0.21
Scarf1Q5ND28 Chchd1-203ENSMUST00000224633 557 ntBASIC16.34■□□□□ 0.21
Scarf1Q5ND28 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scarf1Q5ND28 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Scarf1Q5ND28 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Scarf1Q5ND28 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scarf1Q5ND28 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Scarf1Q5ND28 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Scarf1Q5ND28 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Scarf1Q5ND28 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Scarf1Q5ND28 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Scarf1Q5ND28 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scarf1Q5ND28 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Scarf1Q5ND28 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scarf1Q5ND28 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.33■□□□□ 0.2
Scarf1Q5ND28 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Scarf1Q5ND28 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.33■□□□□ 0.2
Scarf1Q5ND28 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC16.33■□□□□ 0.2
Scarf1Q5ND28 AC154828.2-201ENSMUST00000220908 1070 ntBASIC16.33■□□□□ 0.2
Scarf1Q5ND28 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.33■□□□□ 0.2
Scarf1Q5ND28 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scarf1Q5ND28 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Scarf1Q5ND28 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Scarf1Q5ND28 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.33■□□□□ 0.2
Scarf1Q5ND28 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Scarf1Q5ND28 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.33■□□□□ 0.2
Scarf1Q5ND28 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.33■□□□□ 0.2
Scarf1Q5ND28 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scarf1Q5ND28 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scarf1Q5ND28 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scarf1Q5ND28 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scarf1Q5ND28 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scarf1Q5ND28 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.33■□□□□ 0.2
Scarf1Q5ND28 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Scarf1Q5ND28 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scarf1Q5ND28 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Scarf1Q5ND28 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scarf1Q5ND28 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scarf1Q5ND28 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scarf1Q5ND28 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scarf1Q5ND28 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scarf1Q5ND28 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scarf1Q5ND28 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scarf1Q5ND28 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scarf1Q5ND28 Gm6973-201ENSMUST00000117080 721 ntBASIC16.32■□□□□ 0.2
Scarf1Q5ND28 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.32■□□□□ 0.2
Scarf1Q5ND28 Gm6736-201ENSMUST00000166583 948 ntBASIC16.32■□□□□ 0.2
Scarf1Q5ND28 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scarf1Q5ND28 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scarf1Q5ND28 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scarf1Q5ND28 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scarf1Q5ND28 Gm44387-201ENSMUST00000196298 145 ntBASIC16.32■□□□□ 0.2
Scarf1Q5ND28 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scarf1Q5ND28 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.32■□□□□ 0.2
Scarf1Q5ND28 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.32■□□□□ 0.2
Scarf1Q5ND28 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.32■□□□□ 0.2
Scarf1Q5ND28 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scarf1Q5ND28 CT025642.1-201ENSMUST00000224734 1219 ntBASIC16.32■□□□□ 0.2
Scarf1Q5ND28 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.32■□□□□ 0.2
Scarf1Q5ND28 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scarf1Q5ND28 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scarf1Q5ND28 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scarf1Q5ND28 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scarf1Q5ND28 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scarf1Q5ND28 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms