Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scn2bQ56A07 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.77□□□□□ -0.05
Scn2bQ56A07 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Scn2bQ56A07 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scn2bQ56A07 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scn2bQ56A07 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Scn2bQ56A07 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scn2bQ56A07 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scn2bQ56A07 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.76□□□□□ -0.05
Scn2bQ56A07 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn2bQ56A07 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Scn2bQ56A07 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Scn2bQ56A07 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Scn2bQ56A07 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn2bQ56A07 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn2bQ56A07 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn2bQ56A07 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn2bQ56A07 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn2bQ56A07 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn2bQ56A07 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn2bQ56A07 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn2bQ56A07 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Scn2bQ56A07 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Scn2bQ56A07 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Scn2bQ56A07 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.76□□□□□ -0.05
Scn2bQ56A07 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Scn2bQ56A07 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn2bQ56A07 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.76□□□□□ -0.05
Scn2bQ56A07 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Scn2bQ56A07 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.76□□□□□ -0.05
Scn2bQ56A07 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Scn2bQ56A07 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn2bQ56A07 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.76□□□□□ -0.05
Scn2bQ56A07 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn2bQ56A07 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn2bQ56A07 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn2bQ56A07 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Scn2bQ56A07 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn2bQ56A07 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn2bQ56A07 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn2bQ56A07 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Scn2bQ56A07 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.75□□□□□ -0.05
Scn2bQ56A07 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.75□□□□□ -0.05
Scn2bQ56A07 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Scn2bQ56A07 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn2bQ56A07 Gm25990-201ENSMUST00000102440 86 ntBASIC14.75□□□□□ -0.05
Scn2bQ56A07 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Scn2bQ56A07 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn2bQ56A07 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Scn2bQ56A07 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.75□□□□□ -0.05
Scn2bQ56A07 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.75□□□□□ -0.05
Scn2bQ56A07 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.75□□□□□ -0.05
Scn2bQ56A07 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.75□□□□□ -0.05
Scn2bQ56A07 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn2bQ56A07 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Scn2bQ56A07 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Scn2bQ56A07 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn2bQ56A07 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn2bQ56A07 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn2bQ56A07 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn2bQ56A07 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.75□□□□□ -0.05
Scn2bQ56A07 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn2bQ56A07 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.75□□□□□ -0.05
Scn2bQ56A07 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn2bQ56A07 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Scn2bQ56A07 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn2bQ56A07 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.75□□□□□ -0.05
Scn2bQ56A07 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn2bQ56A07 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn2bQ56A07 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.74□□□□□ -0.05
Scn2bQ56A07 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn2bQ56A07 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn2bQ56A07 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn2bQ56A07 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scn2bQ56A07 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn2bQ56A07 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn2bQ56A07 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Scn2bQ56A07 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.74□□□□□ -0.05
Scn2bQ56A07 Gm18733-201ENSMUST00000173950 856 ntBASIC14.74□□□□□ -0.05
Scn2bQ56A07 Gm10499-201ENSMUST00000174094 934 ntBASIC14.74□□□□□ -0.05
Scn2bQ56A07 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.74□□□□□ -0.05
Scn2bQ56A07 Gm10060-201ENSMUST00000212002 111 ntBASIC14.74□□□□□ -0.05
Scn2bQ56A07 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.74□□□□□ -0.05
Scn2bQ56A07 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.74□□□□□ -0.05
Scn2bQ56A07 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn2bQ56A07 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn2bQ56A07 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn2bQ56A07 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn2bQ56A07 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn2bQ56A07 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn2bQ56A07 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.74□□□□□ -0.05
Scn2bQ56A07 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn2bQ56A07 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn2bQ56A07 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scn2bQ56A07 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn2bQ56A07 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn2bQ56A07 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn2bQ56A07 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn2bQ56A07 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn2bQ56A07 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms