Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.28■□□□□ 0.36
Cdkl5Q3UTQ8 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl5Q3UTQ8 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.28■□□□□ 0.36
Cdkl5Q3UTQ8 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl5Q3UTQ8 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl5Q3UTQ8 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.28■□□□□ 0.36
Cdkl5Q3UTQ8 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.28■□□□□ 0.36
Cdkl5Q3UTQ8 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.28■□□□□ 0.36
Cdkl5Q3UTQ8 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.28■□□□□ 0.36
Cdkl5Q3UTQ8 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl5Q3UTQ8 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl5Q3UTQ8 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.28■□□□□ 0.36
Cdkl5Q3UTQ8 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl5Q3UTQ8 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cdkl5Q3UTQ8 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl5Q3UTQ8 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl5Q3UTQ8 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl5Q3UTQ8 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.28■□□□□ 0.36
Cdkl5Q3UTQ8 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl5Q3UTQ8 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC17.28■□□□□ 0.36
Cdkl5Q3UTQ8 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.28■□□□□ 0.36
Cdkl5Q3UTQ8 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl5Q3UTQ8 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl5Q3UTQ8 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cdkl5Q3UTQ8 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl5Q3UTQ8 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cdkl5Q3UTQ8 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Cdkl5Q3UTQ8 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl5Q3UTQ8 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl5Q3UTQ8 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.27■□□□□ 0.36
Cdkl5Q3UTQ8 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdkl5Q3UTQ8 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.27■□□□□ 0.36
Cdkl5Q3UTQ8 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdkl5Q3UTQ8 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdkl5Q3UTQ8 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdkl5Q3UTQ8 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdkl5Q3UTQ8 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdkl5Q3UTQ8 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdkl5Q3UTQ8 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.27■□□□□ 0.36
Cdkl5Q3UTQ8 Gm2272-201ENSMUST00000194903 582 ntBASIC17.27■□□□□ 0.36
Cdkl5Q3UTQ8 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.27■□□□□ 0.36
Cdkl5Q3UTQ8 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.27■□□□□ 0.36
Cdkl5Q3UTQ8 Psmb5-202ENSMUST00000227257 622 ntBASIC17.27■□□□□ 0.36
Cdkl5Q3UTQ8 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cdkl5Q3UTQ8 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdkl5Q3UTQ8 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Cdkl5Q3UTQ8 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdkl5Q3UTQ8 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdkl5Q3UTQ8 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdkl5Q3UTQ8 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cdkl5Q3UTQ8 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Cdkl5Q3UTQ8 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cdkl5Q3UTQ8 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdkl5Q3UTQ8 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdkl5Q3UTQ8 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cdkl5Q3UTQ8 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.26■□□□□ 0.35
Cdkl5Q3UTQ8 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.26■□□□□ 0.35
Cdkl5Q3UTQ8 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdkl5Q3UTQ8 Gm13597-201ENSMUST00000121239 375 ntBASIC17.26■□□□□ 0.35
Cdkl5Q3UTQ8 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cdkl5Q3UTQ8 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cdkl5Q3UTQ8 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.26■□□□□ 0.35
Cdkl5Q3UTQ8 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdkl5Q3UTQ8 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdkl5Q3UTQ8 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdkl5Q3UTQ8 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdkl5Q3UTQ8 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cdkl5Q3UTQ8 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdkl5Q3UTQ8 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cdkl5Q3UTQ8 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdkl5Q3UTQ8 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdkl5Q3UTQ8 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cdkl5Q3UTQ8 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdkl5Q3UTQ8 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdkl5Q3UTQ8 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdkl5Q3UTQ8 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdkl5Q3UTQ8 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdkl5Q3UTQ8 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cdkl5Q3UTQ8 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdkl5Q3UTQ8 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdkl5Q3UTQ8 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cdkl5Q3UTQ8 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdkl5Q3UTQ8 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cdkl5Q3UTQ8 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cdkl5Q3UTQ8 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.25■□□□□ 0.35
Cdkl5Q3UTQ8 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdkl5Q3UTQ8 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.25■□□□□ 0.35
Cdkl5Q3UTQ8 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.25■□□□□ 0.35
Cdkl5Q3UTQ8 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdkl5Q3UTQ8 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdkl5Q3UTQ8 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdkl5Q3UTQ8 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cdkl5Q3UTQ8 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cdkl5Q3UTQ8 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdkl5Q3UTQ8 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdkl5Q3UTQ8 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdkl5Q3UTQ8 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdkl5Q3UTQ8 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cdkl5Q3UTQ8 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cdkl5Q3UTQ8 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms