Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.16■□□□□ 0.02
Naf1Q3UMQ8 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Naf1Q3UMQ8 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Naf1Q3UMQ8 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Naf1Q3UMQ8 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Naf1Q3UMQ8 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Naf1Q3UMQ8 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Naf1Q3UMQ8 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm22065-201ENSMUST00000103753 110 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm22066-201ENSMUST00000103761 110 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm24932-201ENSMUST00000103763 110 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm24115-201ENSMUST00000103799 110 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm22190-201ENSMUST00000103827 110 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm22191-201ENSMUST00000103831 110 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm24721-201ENSMUST00000103849 110 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm28018-201ENSMUST00000103869 110 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm26399-201ENSMUST00000103937 110 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm25349-201ENSMUST00000177728 110 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm23616-201ENSMUST00000177797 110 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm25871-201ENSMUST00000177816 110 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm24752-201ENSMUST00000178240 110 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm24496-201ENSMUST00000178287 110 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm25649-201ENSMUST00000178476 110 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm25548-201ENSMUST00000178681 110 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm23147-201ENSMUST00000178841 110 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm26095-201ENSMUST00000179270 110 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm22171-201ENSMUST00000179283 110 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm23936-201ENSMUST00000179354 110 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm22619-201ENSMUST00000179516 110 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm25255-201ENSMUST00000179579 110 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm24755-201ENSMUST00000179691 110 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm26506-201ENSMUST00000179692 110 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm25086-201ENSMUST00000179931 110 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm23243-201ENSMUST00000180047 110 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm24659-201ENSMUST00000180212 110 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm24169-201ENSMUST00000180244 110 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm23689-201ENSMUST00000180354 110 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm27359-201ENSMUST00000184153 110 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm27785-201ENSMUST00000184268 110 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm27466-201ENSMUST00000184396 110 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm27703-201ENSMUST00000184836 110 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm43767-201ENSMUST00000198933 381 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Naf1Q3UMQ8 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 Gm10576-201ENSMUST00000191927 825 ntBASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms