Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upf3aQ3ULJ3 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Upf3aQ3ULJ3 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Upf3aQ3ULJ3 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Upf3aQ3ULJ3 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.64■□□□□ 0.09
Upf3aQ3ULJ3 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upf3aQ3ULJ3 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Upf3aQ3ULJ3 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.64■□□□□ 0.09
Upf3aQ3ULJ3 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Upf3aQ3ULJ3 AC124732.1-201ENSMUST00000221551 910 ntBASIC15.64■□□□□ 0.09
Upf3aQ3ULJ3 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.64■□□□□ 0.09
Upf3aQ3ULJ3 Syt7-205ENSMUST00000224135 1557 ntBASIC15.64■□□□□ 0.09
Upf3aQ3ULJ3 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upf3aQ3ULJ3 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upf3aQ3ULJ3 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upf3aQ3ULJ3 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upf3aQ3ULJ3 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Upf3aQ3ULJ3 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Upf3aQ3ULJ3 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Upf3aQ3ULJ3 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upf3aQ3ULJ3 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upf3aQ3ULJ3 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upf3aQ3ULJ3 Gm3365-201ENSMUST00000216296 1480 ntBASIC15.64■□□□□ 0.09
Upf3aQ3ULJ3 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Upf3aQ3ULJ3 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upf3aQ3ULJ3 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upf3aQ3ULJ3 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.64■□□□□ 0.09
Upf3aQ3ULJ3 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
Upf3aQ3ULJ3 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upf3aQ3ULJ3 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Upf3aQ3ULJ3 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upf3aQ3ULJ3 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upf3aQ3ULJ3 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upf3aQ3ULJ3 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upf3aQ3ULJ3 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.63■□□□□ 0.09
Upf3aQ3ULJ3 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.63■□□□□ 0.09
Upf3aQ3ULJ3 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upf3aQ3ULJ3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Upf3aQ3ULJ3 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upf3aQ3ULJ3 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upf3aQ3ULJ3 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Upf3aQ3ULJ3 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Upf3aQ3ULJ3 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upf3aQ3ULJ3 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Upf3aQ3ULJ3 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.63■□□□□ 0.09
Upf3aQ3ULJ3 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upf3aQ3ULJ3 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.63■□□□□ 0.09
Upf3aQ3ULJ3 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upf3aQ3ULJ3 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.63■□□□□ 0.09
Upf3aQ3ULJ3 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Upf3aQ3ULJ3 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upf3aQ3ULJ3 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upf3aQ3ULJ3 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upf3aQ3ULJ3 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upf3aQ3ULJ3 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upf3aQ3ULJ3 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upf3aQ3ULJ3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upf3aQ3ULJ3 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upf3aQ3ULJ3 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Upf3aQ3ULJ3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Upf3aQ3ULJ3 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Upf3aQ3ULJ3 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Upf3aQ3ULJ3 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Upf3aQ3ULJ3 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Upf3aQ3ULJ3 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Upf3aQ3ULJ3 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Upf3aQ3ULJ3 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Upf3aQ3ULJ3 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Upf3aQ3ULJ3 Gm15321-201ENSMUST00000121290 288 ntBASIC15.62■□□□□ 0.09
Upf3aQ3ULJ3 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
Upf3aQ3ULJ3 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Upf3aQ3ULJ3 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.62■□□□□ 0.09
Upf3aQ3ULJ3 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Upf3aQ3ULJ3 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Upf3aQ3ULJ3 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Upf3aQ3ULJ3 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Upf3aQ3ULJ3 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Upf3aQ3ULJ3 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Upf3aQ3ULJ3 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Upf3aQ3ULJ3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Upf3aQ3ULJ3 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Upf3aQ3ULJ3 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Upf3aQ3ULJ3 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Upf3aQ3ULJ3 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Upf3aQ3ULJ3 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Upf3aQ3ULJ3 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Upf3aQ3ULJ3 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Upf3aQ3ULJ3 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Upf3aQ3ULJ3 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Upf3aQ3ULJ3 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Upf3aQ3ULJ3 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Upf3aQ3ULJ3 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.61■□□□□ 0.09
Upf3aQ3ULJ3 App-207ENSMUST00000227737 2827 ntBASIC15.61■□□□□ 0.09
Upf3aQ3ULJ3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Upf3aQ3ULJ3 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Upf3aQ3ULJ3 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.61■□□□□ 0.09
Upf3aQ3ULJ3 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.61■□□□□ 0.09
Upf3aQ3ULJ3 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Upf3aQ3ULJ3 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Upf3aQ3ULJ3 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms