Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp25Q3U435 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.03□□□□□ -0.16
Mmp25Q3U435 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Mmp25Q3U435 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.03□□□□□ -0.16
Mmp25Q3U435 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp25Q3U435 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp25Q3U435 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp25Q3U435 Mir1895-201ENSMUST00000122615 79 ntBASIC14.03□□□□□ -0.16
Mmp25Q3U435 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp25Q3U435 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Mmp25Q3U435 Gm27494-201ENSMUST00000184735 189 ntBASIC14.03□□□□□ -0.16
Mmp25Q3U435 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.03□□□□□ -0.16
Mmp25Q3U435 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Mmp25Q3U435 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp25Q3U435 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp25Q3U435 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.03□□□□□ -0.16
Mmp25Q3U435 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp25Q3U435 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.03□□□□□ -0.16
Mmp25Q3U435 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Mmp25Q3U435 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp25Q3U435 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp25Q3U435 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp25Q3U435 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp25Q3U435 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Mmp25Q3U435 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp25Q3U435 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp25Q3U435 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp25Q3U435 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Mmp25Q3U435 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp25Q3U435 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp25Q3U435 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Mmp25Q3U435 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp25Q3U435 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp25Q3U435 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp25Q3U435 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp25Q3U435 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Mmp25Q3U435 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Mmp25Q3U435 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp25Q3U435 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp25Q3U435 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
Mmp25Q3U435 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp25Q3U435 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp25Q3U435 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.02□□□□□ -0.16
Mmp25Q3U435 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp25Q3U435 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp25Q3U435 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Mmp25Q3U435 Gm20553-201ENSMUST00000204205 844 ntBASIC14.02□□□□□ -0.17
Mmp25Q3U435 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.02□□□□□ -0.17
Mmp25Q3U435 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.02□□□□□ -0.17
Mmp25Q3U435 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp25Q3U435 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp25Q3U435 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Mmp25Q3U435 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp25Q3U435 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp25Q3U435 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp25Q3U435 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp25Q3U435 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Mmp25Q3U435 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp25Q3U435 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Mmp25Q3U435 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp25Q3U435 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp25Q3U435 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp25Q3U435 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp25Q3U435 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp25Q3U435 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Mmp25Q3U435 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.01□□□□□ -0.17
Mmp25Q3U435 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.01□□□□□ -0.17
Mmp25Q3U435 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp25Q3U435 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp25Q3U435 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp25Q3U435 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.01□□□□□ -0.17
Mmp25Q3U435 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp25Q3U435 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Mmp25Q3U435 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp25Q3U435 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp25Q3U435 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Mmp25Q3U435 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp25Q3U435 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp25Q3U435 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Mmp25Q3U435 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp25Q3U435 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp25Q3U435 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp25Q3U435 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp25Q3U435 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14□□□□□ -0.17
Mmp25Q3U435 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp25Q3U435 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14□□□□□ -0.17
Mmp25Q3U435 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14□□□□□ -0.17
Mmp25Q3U435 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp25Q3U435 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14□□□□□ -0.17
Mmp25Q3U435 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14□□□□□ -0.17
Mmp25Q3U435 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14□□□□□ -0.17
Mmp25Q3U435 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp25Q3U435 CT030684.1-201ENSMUST00000227292 914 ntBASIC14□□□□□ -0.17
Mmp25Q3U435 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp25Q3U435 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14□□□□□ -0.17
Mmp25Q3U435 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp25Q3U435 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14□□□□□ -0.17
Mmp25Q3U435 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp25Q3U435 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp25Q3U435 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms