Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Q3U1D9 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Q3U1D9 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.95□□□□□ -0.34
Q3U1D9 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Q3U1D9 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.95□□□□□ -0.34
Q3U1D9 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Q3U1D9 AA543401-201ENSMUST00000164248 1269 ntBASIC12.95□□□□□ -0.34
Q3U1D9 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Q3U1D9 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Q3U1D9 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Q3U1D9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Q3U1D9 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Q3U1D9 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Q3U1D9 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Q3U1D9 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Q3U1D9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Q3U1D9 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Q3U1D9 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.94□□□□□ -0.34
Q3U1D9 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Q3U1D9 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Q3U1D9 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Q3U1D9 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Q3U1D9 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Q3U1D9 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Q3U1D9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Q3U1D9 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Q3U1D9 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Q3U1D9 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Q3U1D9 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Q3U1D9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Q3U1D9 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Q3U1D9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Q3U1D9 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Q3U1D9 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Q3U1D9 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Q3U1D9 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Q3U1D9 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Q3U1D9 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.94□□□□□ -0.34
Q3U1D9 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Q3U1D9 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.94□□□□□ -0.34
Q3U1D9 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.94□□□□□ -0.34
Q3U1D9 Gm22175-201ENSMUST00000175007 78 ntBASIC12.94□□□□□ -0.34
Q3U1D9 Gm9824-201ENSMUST00000178707 561 ntBASIC12.94□□□□□ -0.34
Q3U1D9 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Q3U1D9 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.94□□□□□ -0.34
Q3U1D9 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.94□□□□□ -0.34
Q3U1D9 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Q3U1D9 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Q3U1D9 Prob1-201ENSMUST00000097619 3021 ntBASIC12.94□□□□□ -0.34
Q3U1D9 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Q3U1D9 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Q3U1D9 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.94□□□□□ -0.34
Q3U1D9 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Q3U1D9 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.94□□□□□ -0.34
Q3U1D9 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Q3U1D9 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Q3U1D9 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.94□□□□□ -0.34
Q3U1D9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Q3U1D9 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Q3U1D9 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Q3U1D9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Q3U1D9 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Q3U1D9 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Q3U1D9 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Q3U1D9 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.93□□□□□ -0.34
Q3U1D9 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Q3U1D9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Q3U1D9 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Q3U1D9 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.93□□□□□ -0.34
Q3U1D9 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.93□□□□□ -0.34
Q3U1D9 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.93□□□□□ -0.34
Q3U1D9 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Q3U1D9 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.93□□□□□ -0.34
Q3U1D9 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.93□□□□□ -0.34
Q3U1D9 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.93□□□□□ -0.34
Q3U1D9 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.93□□□□□ -0.34
Q3U1D9 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.93□□□□□ -0.34
Q3U1D9 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Q3U1D9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Q3U1D9 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Q3U1D9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.93□□□□□ -0.34
Q3U1D9 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Q3U1D9 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Q3U1D9 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Q3U1D9 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Q3U1D9 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Q3U1D9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Q3U1D9 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Q3U1D9 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Q3U1D9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q3U1D9 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.92□□□□□ -0.34
Q3U1D9 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q3U1D9 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q3U1D9 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q3U1D9 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q3U1D9 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q3U1D9 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Q3U1D9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q3U1D9 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q3U1D9 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms