Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Cul4aQ3TCH7 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cul4aQ3TCH7 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Cul4aQ3TCH7 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cul4aQ3TCH7 Ank2-226ENSMUST00000189368 339 ntBASIC15.68■□□□□ 0.1
Cul4aQ3TCH7 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cul4aQ3TCH7 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.68■□□□□ 0.1
Cul4aQ3TCH7 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cul4aQ3TCH7 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cul4aQ3TCH7 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cul4aQ3TCH7 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cul4aQ3TCH7 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cul4aQ3TCH7 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cul4aQ3TCH7 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cul4aQ3TCH7 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cul4aQ3TCH7 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cul4aQ3TCH7 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cul4aQ3TCH7 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.67■□□□□ 0.1
Cul4aQ3TCH7 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.67■□□□□ 0.1
Cul4aQ3TCH7 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cul4aQ3TCH7 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cul4aQ3TCH7 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cul4aQ3TCH7 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Cul4aQ3TCH7 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cul4aQ3TCH7 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cul4aQ3TCH7 Gm28033-201ENSMUST00000184224 96 ntBASIC15.67■□□□□ 0.1
Cul4aQ3TCH7 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cul4aQ3TCH7 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cul4aQ3TCH7 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cul4aQ3TCH7 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.67■□□□□ 0.1
Cul4aQ3TCH7 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cul4aQ3TCH7 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cul4aQ3TCH7 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cul4aQ3TCH7 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cul4aQ3TCH7 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.67■□□□□ 0.1
Cul4aQ3TCH7 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.67■□□□□ 0.1
Cul4aQ3TCH7 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cul4aQ3TCH7 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.67■□□□□ 0.1
Cul4aQ3TCH7 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cul4aQ3TCH7 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.67■□□□□ 0.1
Cul4aQ3TCH7 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cul4aQ3TCH7 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.67■□□□□ 0.1
Cul4aQ3TCH7 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cul4aQ3TCH7 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cul4aQ3TCH7 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cul4aQ3TCH7 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cul4aQ3TCH7 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cul4aQ3TCH7 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cul4aQ3TCH7 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cul4aQ3TCH7 Gm11764-201ENSMUST00000120221 623 ntBASIC15.66■□□□□ 0.1
Cul4aQ3TCH7 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cul4aQ3TCH7 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cul4aQ3TCH7 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.66■□□□□ 0.1
Cul4aQ3TCH7 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cul4aQ3TCH7 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.66■□□□□ 0.1
Cul4aQ3TCH7 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cul4aQ3TCH7 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cul4aQ3TCH7 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cul4aQ3TCH7 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.66■□□□□ 0.1
Cul4aQ3TCH7 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cul4aQ3TCH7 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cul4aQ3TCH7 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cul4aQ3TCH7 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.66■□□□□ 0.1
Cul4aQ3TCH7 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cul4aQ3TCH7 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cul4aQ3TCH7 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cul4aQ3TCH7 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cul4aQ3TCH7 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cul4aQ3TCH7 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cul4aQ3TCH7 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cul4aQ3TCH7 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cul4aQ3TCH7 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Cul4aQ3TCH7 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cul4aQ3TCH7 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cul4aQ3TCH7 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cul4aQ3TCH7 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cul4aQ3TCH7 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cul4aQ3TCH7 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.65■□□□□ 0.1
Cul4aQ3TCH7 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cul4aQ3TCH7 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.65■□□□□ 0.1
Cul4aQ3TCH7 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cul4aQ3TCH7 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.65■□□□□ 0.1
Cul4aQ3TCH7 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Cul4aQ3TCH7 Gm34391-201ENSMUST00000203706 907 ntBASIC15.65■□□□□ 0.1
Cul4aQ3TCH7 Birc2-201ENSMUST00000054878 378 ntBASIC15.65■□□□□ 0.1
Cul4aQ3TCH7 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.65■□□□□ 0.1
Cul4aQ3TCH7 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cul4aQ3TCH7 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cul4aQ3TCH7 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cul4aQ3TCH7 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cul4aQ3TCH7 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cul4aQ3TCH7 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cul4aQ3TCH7 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cul4aQ3TCH7 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cul4aQ3TCH7 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cul4aQ3TCH7 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cul4aQ3TCH7 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Cul4aQ3TCH7 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cul4aQ3TCH7 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cul4aQ3TCH7 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms