Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trpm1Q2TV84 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Trpm1Q2TV84 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trpm1Q2TV84 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trpm1Q2TV84 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trpm1Q2TV84 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC20.82■□□□□ 0.92
Trpm1Q2TV84 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC20.82■□□□□ 0.92
Trpm1Q2TV84 Gm27514-201ENSMUST00000183692 110 ntBASIC20.82■□□□□ 0.92
Trpm1Q2TV84 Gm21470-201ENSMUST00000187680 696 ntBASIC20.82■□□□□ 0.92
Trpm1Q2TV84 AC156560.2-201ENSMUST00000221232 264 ntBASIC20.82■□□□□ 0.92
Trpm1Q2TV84 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trpm1Q2TV84 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trpm1Q2TV84 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Trpm1Q2TV84 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC20.82■□□□□ 0.92
Trpm1Q2TV84 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trpm1Q2TV84 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trpm1Q2TV84 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trpm1Q2TV84 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trpm1Q2TV84 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trpm1Q2TV84 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trpm1Q2TV84 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trpm1Q2TV84 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Trpm1Q2TV84 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC20.82■□□□□ 0.92
Trpm1Q2TV84 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Trpm1Q2TV84 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trpm1Q2TV84 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trpm1Q2TV84 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Trpm1Q2TV84 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trpm1Q2TV84 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trpm1Q2TV84 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC20.81■□□□□ 0.92
Trpm1Q2TV84 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trpm1Q2TV84 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trpm1Q2TV84 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Trpm1Q2TV84 Gm7287-201ENSMUST00000205267 602 ntBASIC20.81■□□□□ 0.92
Trpm1Q2TV84 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trpm1Q2TV84 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trpm1Q2TV84 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Trpm1Q2TV84 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trpm1Q2TV84 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trpm1Q2TV84 Ccdc166-201ENSMUST00000182172 2584 ntBASIC20.8■□□□□ 0.92
Trpm1Q2TV84 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trpm1Q2TV84 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Trpm1Q2TV84 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Trpm1Q2TV84 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trpm1Q2TV84 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC20.8■□□□□ 0.92
Trpm1Q2TV84 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trpm1Q2TV84 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trpm1Q2TV84 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trpm1Q2TV84 Gm11814-201ENSMUST00000119515 929 ntBASIC20.8■□□□□ 0.92
Trpm1Q2TV84 Gm12416-201ENSMUST00000120911 1008 ntBASIC20.8■□□□□ 0.92
Trpm1Q2TV84 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC20.8■□□□□ 0.92
Trpm1Q2TV84 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC20.8■□□□□ 0.92
Trpm1Q2TV84 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
Trpm1Q2TV84 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trpm1Q2TV84 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trpm1Q2TV84 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trpm1Q2TV84 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC20.8■□□□□ 0.92
Trpm1Q2TV84 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Trpm1Q2TV84 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trpm1Q2TV84 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trpm1Q2TV84 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trpm1Q2TV84 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Trpm1Q2TV84 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trpm1Q2TV84 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trpm1Q2TV84 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trpm1Q2TV84 Gm15429-201ENSMUST00000151268 798 ntBASIC20.79■□□□□ 0.92
Trpm1Q2TV84 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trpm1Q2TV84 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC20.79■□□□□ 0.92
Trpm1Q2TV84 Gm8652-201ENSMUST00000181363 964 ntBASIC20.79■□□□□ 0.92
Trpm1Q2TV84 Gm42442-201ENSMUST00000197951 1133 ntBASIC20.79■□□□□ 0.92
Trpm1Q2TV84 Gm45841-201ENSMUST00000207700 164 ntBASIC20.79■□□□□ 0.92
Trpm1Q2TV84 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC20.79■□□□□ 0.92
Trpm1Q2TV84 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trpm1Q2TV84 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trpm1Q2TV84 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trpm1Q2TV84 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trpm1Q2TV84 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trpm1Q2TV84 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trpm1Q2TV84 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC20.79■□□□□ 0.92
Trpm1Q2TV84 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trpm1Q2TV84 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trpm1Q2TV84 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Trpm1Q2TV84 Gm42853-201ENSMUST00000201273 1387 ntBASIC20.79■□□□□ 0.92
Trpm1Q2TV84 AL645783.1-201ENSMUST00000221416 1832 ntBASIC20.79■□□□□ 0.92
Trpm1Q2TV84 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Trpm1Q2TV84 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC20.79■□□□□ 0.92
Trpm1Q2TV84 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trpm1Q2TV84 Gm18827-201ENSMUST00000188341 790 ntBASIC20.78■□□□□ 0.92
Trpm1Q2TV84 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trpm1Q2TV84 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trpm1Q2TV84 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trpm1Q2TV84 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trpm1Q2TV84 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trpm1Q2TV84 Gm13050-201ENSMUST00000122149 1345 ntBASIC20.78■□□□□ 0.92
Trpm1Q2TV84 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trpm1Q2TV84 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trpm1Q2TV84 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Trpm1Q2TV84 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Trpm1Q2TV84 App-207ENSMUST00000227737 2827 ntBASIC20.78■□□□□ 0.92
Trpm1Q2TV84 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms