Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
Ush2AQ2QI47 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ush2AQ2QI47 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
Ush2AQ2QI47 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
Ush2AQ2QI47 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC7.77□□□□□ -1.16
Ush2AQ2QI47 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
Ush2AQ2QI47 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ush2AQ2QI47 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ush2AQ2QI47 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ush2AQ2QI47 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC7.77□□□□□ -1.17
Ush2AQ2QI47 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Ush2AQ2QI47 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ush2AQ2QI47 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC7.77□□□□□ -1.17
Ush2AQ2QI47 Ankra2-208ENSMUST00000226100 1476 ntBASIC7.77□□□□□ -1.17
Ush2AQ2QI47 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ush2AQ2QI47 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ush2AQ2QI47 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC7.77□□□□□ -1.17
Ush2AQ2QI47 Gm25927-201ENSMUST00000175058 117 ntBASIC7.77□□□□□ -1.17
Ush2AQ2QI47 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ush2AQ2QI47 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ush2AQ2QI47 Gm9431-201ENSMUST00000119765 1051 ntBASIC7.77□□□□□ -1.17
Ush2AQ2QI47 Gm25951-201ENSMUST00000175330 64 ntBASIC7.77□□□□□ -1.17
Ush2AQ2QI47 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Ush2AQ2QI47 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ush2AQ2QI47 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ush2AQ2QI47 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ush2AQ2QI47 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ush2AQ2QI47 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ush2AQ2QI47 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
Ush2AQ2QI47 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Ush2AQ2QI47 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Ush2AQ2QI47 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Ush2AQ2QI47 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC7.77□□□□□ -1.17
Ush2AQ2QI47 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Ush2AQ2QI47 Gm3318-201ENSMUST00000217604 1183 ntBASIC7.77□□□□□ -1.17
Ush2AQ2QI47 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ush2AQ2QI47 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Ush2AQ2QI47 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC7.77□□□□□ -1.17
Ush2AQ2QI47 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ush2AQ2QI47 Gm44999-201ENSMUST00000207456 1493 ntBASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Gm8862-201ENSMUST00000198379 1346 ntBASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Gm9124-201ENSMUST00000191789 1092 ntBASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Gm9113-201ENSMUST00000192510 1018 ntBASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Gm9131-201ENSMUST00000193557 1089 ntBASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Gm9121-201ENSMUST00000193749 1071 ntBASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Gm19640-201ENSMUST00000214849 464 ntBASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Gm11439-201ENSMUST00000118598 409 ntBASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Gm11597-201ENSMUST00000121423 964 ntBASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Tyms-ps-201ENSMUST00000219550 915 ntBASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Gm8894-201ENSMUST00000074642 666 ntBASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ush2AQ2QI47 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Gm15240-201ENSMUST00000118156 720 ntBASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ush2AQ2QI47 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ush2AQ2QI47 AC153366.2-201ENSMUST00000219461 1984 ntBASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms