Protein–RNA interactions for Protein: Q0GGX2

Znf541, Zinc finger protein 541, mousemouse

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf541Q0GGX2 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Znf541Q0GGX2 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Znf541Q0GGX2 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Znf541Q0GGX2 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Znf541Q0GGX2 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Znf541Q0GGX2 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Znf541Q0GGX2 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Znf541Q0GGX2 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Znf541Q0GGX2 Gm24543-201ENSMUST00000103867 82 ntBASIC18.81■□□□□ 0.6
Znf541Q0GGX2 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Znf541Q0GGX2 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Znf541Q0GGX2 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC18.81■□□□□ 0.6
Znf541Q0GGX2 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC18.81■□□□□ 0.6
Znf541Q0GGX2 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Znf541Q0GGX2 AC124732.2-201ENSMUST00000221977 316 ntBASIC18.81■□□□□ 0.6
Znf541Q0GGX2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Znf541Q0GGX2 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Znf541Q0GGX2 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Znf541Q0GGX2 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Znf541Q0GGX2 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Znf541Q0GGX2 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Znf541Q0GGX2 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Znf541Q0GGX2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Znf541Q0GGX2 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Znf541Q0GGX2 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Znf541Q0GGX2 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Znf541Q0GGX2 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Znf541Q0GGX2 Gm13517-201ENSMUST00000120782 1495 ntBASIC18.8■□□□□ 0.6
Znf541Q0GGX2 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Znf541Q0GGX2 Gm27622-201ENSMUST00000183779 60 ntBASIC18.8■□□□□ 0.6
Znf541Q0GGX2 Gm44872-201ENSMUST00000207864 420 ntBASIC18.8■□□□□ 0.6
Znf541Q0GGX2 AC159114.1-201ENSMUST00000220349 266 ntBASIC18.8■□□□□ 0.6
Znf541Q0GGX2 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Znf541Q0GGX2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC18.8■□□□□ 0.6
Znf541Q0GGX2 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Znf541Q0GGX2 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Znf541Q0GGX2 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Znf541Q0GGX2 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC18.79■□□□□ 0.6
Znf541Q0GGX2 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Znf541Q0GGX2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Znf541Q0GGX2 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Znf541Q0GGX2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Znf541Q0GGX2 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Znf541Q0GGX2 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Znf541Q0GGX2 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Znf541Q0GGX2 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Znf541Q0GGX2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.79■□□□□ 0.6
Znf541Q0GGX2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Znf541Q0GGX2 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC18.79■□□□□ 0.6
Znf541Q0GGX2 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Znf541Q0GGX2 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Znf541Q0GGX2 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Znf541Q0GGX2 Gm15653-201ENSMUST00000119247 907 ntBASIC18.79■□□□□ 0.6
Znf541Q0GGX2 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC18.79■□□□□ 0.6
Znf541Q0GGX2 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC18.79■□□□□ 0.6
Znf541Q0GGX2 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Znf541Q0GGX2 Gm27321-201ENSMUST00000185021 205 ntBASIC18.79■□□□□ 0.6
Znf541Q0GGX2 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Znf541Q0GGX2 AC090659.2-201ENSMUST00000225378 1186 ntBASIC18.79■□□□□ 0.6
Znf541Q0GGX2 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Znf541Q0GGX2 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Znf541Q0GGX2 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Znf541Q0GGX2 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Znf541Q0GGX2 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Znf541Q0GGX2 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC18.78■□□□□ 0.6
Znf541Q0GGX2 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Znf541Q0GGX2 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Znf541Q0GGX2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Znf541Q0GGX2 Gm12134-201ENSMUST00000122109 520 ntBASIC18.78■□□□□ 0.6
Znf541Q0GGX2 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Znf541Q0GGX2 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC18.78■□□□□ 0.6
Znf541Q0GGX2 Gm38294-201ENSMUST00000192831 381 ntBASIC18.78■□□□□ 0.6
Znf541Q0GGX2 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18.78■□□□□ 0.6
Znf541Q0GGX2 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.78■□□□□ 0.6
Znf541Q0GGX2 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC18.78■□□□□ 0.6
Znf541Q0GGX2 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC18.78■□□□□ 0.6
Znf541Q0GGX2 AC121598.1-201ENSMUST00000228224 1019 ntBASIC18.78■□□□□ 0.6
Znf541Q0GGX2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
Znf541Q0GGX2 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Znf541Q0GGX2 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Znf541Q0GGX2 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.78■□□□□ 0.6
Znf541Q0GGX2 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Znf541Q0GGX2 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Znf541Q0GGX2 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC18.77■□□□□ 0.6
Znf541Q0GGX2 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Znf541Q0GGX2 Gm45751-201ENSMUST00000210185 1573 ntBASIC18.77■□□□□ 0.6
Znf541Q0GGX2 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.77■□□□□ 0.6
Znf541Q0GGX2 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Znf541Q0GGX2 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Znf541Q0GGX2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Znf541Q0GGX2 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Znf541Q0GGX2 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Znf541Q0GGX2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Znf541Q0GGX2 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Znf541Q0GGX2 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Znf541Q0GGX2 Gm44608-201ENSMUST00000206827 855 ntBASIC18.77■□□□□ 0.6
Znf541Q0GGX2 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC18.77■□□□□ 0.6
Znf541Q0GGX2 AC139382.1-201ENSMUST00000221402 498 ntBASIC18.77■□□□□ 0.6
Znf541Q0GGX2 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Znf541Q0GGX2 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms