Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.29□□□□□ -0.12
Hoxc4Q08624 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc4Q08624 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Hoxc4Q08624 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc4Q08624 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.29□□□□□ -0.12
Hoxc4Q08624 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc4Q08624 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Hoxc4Q08624 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc4Q08624 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc4Q08624 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
Hoxc4Q08624 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc4Q08624 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc4Q08624 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc4Q08624 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc4Q08624 Gm8410-201ENSMUST00000117225 605 ntBASIC14.28□□□□□ -0.12
Hoxc4Q08624 Gm13453-201ENSMUST00000118708 357 ntBASIC14.28□□□□□ -0.12
Hoxc4Q08624 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.28□□□□□ -0.12
Hoxc4Q08624 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc4Q08624 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Hoxc4Q08624 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.28□□□□□ -0.12
Hoxc4Q08624 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Hoxc4Q08624 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Hoxc4Q08624 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc4Q08624 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc4Q08624 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc4Q08624 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc4Q08624 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc4Q08624 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc4Q08624 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc4Q08624 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc4Q08624 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc4Q08624 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc4Q08624 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Hoxc4Q08624 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc4Q08624 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc4Q08624 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc4Q08624 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc4Q08624 Gm13223-201ENSMUST00000118609 747 ntBASIC14.27□□□□□ -0.13
Hoxc4Q08624 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Hoxc4Q08624 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc4Q08624 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.27□□□□□ -0.13
Hoxc4Q08624 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc4Q08624 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc4Q08624 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc4Q08624 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc4Q08624 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.27□□□□□ -0.13
Hoxc4Q08624 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc4Q08624 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc4Q08624 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.27□□□□□ -0.13
Hoxc4Q08624 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc4Q08624 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc4Q08624 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc4Q08624 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.26□□□□□ -0.13
Hoxc4Q08624 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc4Q08624 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.26□□□□□ -0.13
Hoxc4Q08624 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Hoxc4Q08624 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc4Q08624 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc4Q08624 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.26□□□□□ -0.13
Hoxc4Q08624 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc4Q08624 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc4Q08624 Gm9719-201ENSMUST00000162765 543 ntBASIC14.26□□□□□ -0.13
Hoxc4Q08624 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc4Q08624 Gm37230-201ENSMUST00000194491 818 ntBASIC14.26□□□□□ -0.13
Hoxc4Q08624 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.26□□□□□ -0.13
Hoxc4Q08624 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Hoxc4Q08624 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc4Q08624 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc4Q08624 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc4Q08624 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc4Q08624 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Hoxc4Q08624 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc4Q08624 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc4Q08624 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc4Q08624 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc4Q08624 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc4Q08624 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.25□□□□□ -0.13
Hoxc4Q08624 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc4Q08624 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc4Q08624 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc4Q08624 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc4Q08624 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc4Q08624 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc4Q08624 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc4Q08624 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Hoxc4Q08624 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc4Q08624 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc4Q08624 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc4Q08624 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Hoxc4Q08624 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc4Q08624 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.25□□□□□ -0.13
Hoxc4Q08624 Gm14057-201ENSMUST00000120631 482 ntBASIC14.25□□□□□ -0.13
Hoxc4Q08624 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc4Q08624 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Hoxc4Q08624 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc4Q08624 Gm29310-201ENSMUST00000185468 696 ntBASIC14.25□□□□□ -0.13
Hoxc4Q08624 Gm21825-201ENSMUST00000185728 696 ntBASIC14.25□□□□□ -0.13
Hoxc4Q08624 Gm29109-201ENSMUST00000185895 696 ntBASIC14.25□□□□□ -0.13
Hoxc4Q08624 Gm21896-201ENSMUST00000186520 696 ntBASIC14.25□□□□□ -0.13
Hoxc4Q08624 Gm21873-201ENSMUST00000186728 696 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms