Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tff1Q08423 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tff1Q08423 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tff1Q08423 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tff1Q08423 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Tff1Q08423 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.41□□□□□ -0.42
Tff1Q08423 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Tff1Q08423 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tff1Q08423 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tff1Q08423 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tff1Q08423 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tff1Q08423 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tff1Q08423 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tff1Q08423 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tff1Q08423 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tff1Q08423 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.4□□□□□ -0.42
Tff1Q08423 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Tff1Q08423 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Tff1Q08423 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tff1Q08423 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tff1Q08423 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tff1Q08423 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.4□□□□□ -0.42
Tff1Q08423 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.4□□□□□ -0.42
Tff1Q08423 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tff1Q08423 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tff1Q08423 Mir5126-201ENSMUST00000175513 77 ntBASIC12.4□□□□□ -0.42
Tff1Q08423 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tff1Q08423 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tff1Q08423 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.4□□□□□ -0.42
Tff1Q08423 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tff1Q08423 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tff1Q08423 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tff1Q08423 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tff1Q08423 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tff1Q08423 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tff1Q08423 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tff1Q08423 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tff1Q08423 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tff1Q08423 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tff1Q08423 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tff1Q08423 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tff1Q08423 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Tff1Q08423 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Tff1Q08423 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Tff1Q08423 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tff1Q08423 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.39□□□□□ -0.43
Tff1Q08423 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tff1Q08423 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.39□□□□□ -0.43
Tff1Q08423 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tff1Q08423 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tff1Q08423 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tff1Q08423 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.39□□□□□ -0.43
Tff1Q08423 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tff1Q08423 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.39□□□□□ -0.43
Tff1Q08423 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tff1Q08423 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Tff1Q08423 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.39□□□□□ -0.43
Tff1Q08423 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tff1Q08423 Gm11779-201ENSMUST00000118541 368 ntBASIC12.39□□□□□ -0.43
Tff1Q08423 Gm15467-201ENSMUST00000120582 445 ntBASIC12.39□□□□□ -0.43
Tff1Q08423 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.39□□□□□ -0.43
Tff1Q08423 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Tff1Q08423 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tff1Q08423 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tff1Q08423 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tff1Q08423 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Tff1Q08423 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tff1Q08423 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.39□□□□□ -0.43
Tff1Q08423 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Tff1Q08423 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tff1Q08423 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tff1Q08423 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Tff1Q08423 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
Tff1Q08423 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tff1Q08423 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tff1Q08423 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tff1Q08423 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tff1Q08423 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Tff1Q08423 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Tff1Q08423 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
Tff1Q08423 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.38□□□□□ -0.43
Tff1Q08423 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tff1Q08423 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tff1Q08423 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Tff1Q08423 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tff1Q08423 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.38□□□□□ -0.43
Tff1Q08423 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tff1Q08423 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tff1Q08423 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tff1Q08423 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Tff1Q08423 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tff1Q08423 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Tff1Q08423 Gm12260-201ENSMUST00000122447 411 ntBASIC12.38□□□□□ -0.43
Tff1Q08423 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tff1Q08423 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tff1Q08423 Gm43575-201ENSMUST00000196420 516 ntBASIC12.38□□□□□ -0.43
Tff1Q08423 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.38□□□□□ -0.43
Tff1Q08423 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.38□□□□□ -0.43
Tff1Q08423 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.38□□□□□ -0.43
Tff1Q08423 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms