Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC14.57□□□□□ -0.08
Col9a1Q05722 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col9a1Q05722 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.57□□□□□ -0.08
Col9a1Q05722 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Col9a1Q05722 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col9a1Q05722 Gm25026-201ENSMUST00000175017 188 ntBASIC14.57□□□□□ -0.08
Col9a1Q05722 Gm43066-201ENSMUST00000199589 1260 ntBASIC14.57□□□□□ -0.08
Col9a1Q05722 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col9a1Q05722 CT009718.3-201ENSMUST00000221116 367 ntBASIC14.57□□□□□ -0.08
Col9a1Q05722 CT009754.4-201ENSMUST00000221430 565 ntBASIC14.57□□□□□ -0.08
Col9a1Q05722 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col9a1Q05722 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.57□□□□□ -0.08
Col9a1Q05722 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col9a1Q05722 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.57□□□□□ -0.08
Col9a1Q05722 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col9a1Q05722 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col9a1Q05722 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Col9a1Q05722 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Col9a1Q05722 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a1Q05722 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a1Q05722 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a1Q05722 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Col9a1Q05722 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a1Q05722 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a1Q05722 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a1Q05722 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.56□□□□□ -0.08
Col9a1Q05722 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a1Q05722 Gm8652-201ENSMUST00000181363 964 ntBASIC14.56□□□□□ -0.08
Col9a1Q05722 Gm27631-201ENSMUST00000184163 466 ntBASIC14.56□□□□□ -0.08
Col9a1Q05722 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.56□□□□□ -0.08
Col9a1Q05722 Gm38341-201ENSMUST00000195357 515 ntBASIC14.56□□□□□ -0.08
Col9a1Q05722 Gm38170-201ENSMUST00000195404 816 ntBASIC14.56□□□□□ -0.08
Col9a1Q05722 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.56□□□□□ -0.08
Col9a1Q05722 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a1Q05722 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a1Q05722 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a1Q05722 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Col9a1Q05722 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a1Q05722 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a1Q05722 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a1Q05722 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.56□□□□□ -0.08
Col9a1Q05722 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a1Q05722 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a1Q05722 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a1Q05722 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a1Q05722 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a1Q05722 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a1Q05722 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col9a1Q05722 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a1Q05722 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a1Q05722 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Col9a1Q05722 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a1Q05722 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a1Q05722 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a1Q05722 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Col9a1Q05722 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Col9a1Q05722 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a1Q05722 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a1Q05722 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a1Q05722 B9d1os-201ENSMUST00000137010 674 ntBASIC14.55□□□□□ -0.08
Col9a1Q05722 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a1Q05722 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Col9a1Q05722 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.55□□□□□ -0.08
Col9a1Q05722 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.55□□□□□ -0.08
Col9a1Q05722 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a1Q05722 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a1Q05722 Gm37293-201ENSMUST00000191658 295 ntBASIC14.55□□□□□ -0.08
Col9a1Q05722 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a1Q05722 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Col9a1Q05722 Gm16476-201ENSMUST00000221544 139 ntBASIC14.55□□□□□ -0.08
Col9a1Q05722 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a1Q05722 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a1Q05722 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a1Q05722 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a1Q05722 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a1Q05722 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a1Q05722 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a1Q05722 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Col9a1Q05722 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a1Q05722 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a1Q05722 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col9a1Q05722 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.54□□□□□ -0.08
Col9a1Q05722 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Col9a1Q05722 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col9a1Q05722 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col9a1Q05722 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col9a1Q05722 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col9a1Q05722 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Col9a1Q05722 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.54□□□□□ -0.08
Col9a1Q05722 Gm12749-201ENSMUST00000122138 1159 ntBASIC14.54□□□□□ -0.08
Col9a1Q05722 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col9a1Q05722 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col9a1Q05722 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col9a1Q05722 Gm6407-201ENSMUST00000176468 549 ntBASIC14.54□□□□□ -0.08
Col9a1Q05722 Gm19184-201ENSMUST00000196798 928 ntBASIC14.54□□□□□ -0.08
Col9a1Q05722 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.54□□□□□ -0.08
Col9a1Q05722 Gm18307-201ENSMUST00000206864 949 ntBASIC14.54□□□□□ -0.08
Col9a1Q05722 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.54□□□□□ -0.08
Col9a1Q05722 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col9a1Q05722 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms