Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Gm4535-201ENSMUST00000182274 558 ntBASIC15.19■□□□□ 0.02
Thumpd3P97770 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Thumpd3P97770 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Thumpd3P97770 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.19■□□□□ 0.02
Thumpd3P97770 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.19■□□□□ 0.02
Thumpd3P97770 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Thumpd3P97770 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.19■□□□□ 0.02
Thumpd3P97770 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.19■□□□□ 0.02
Thumpd3P97770 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.19■□□□□ 0.02
Thumpd3P97770 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Thumpd3P97770 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Thumpd3P97770 Gm10355-201ENSMUST00000097146 517 ntBASIC15.19■□□□□ 0.02
Thumpd3P97770 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Thumpd3P97770 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Thumpd3P97770 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.19■□□□□ 0.02
Thumpd3P97770 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Thumpd3P97770 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Thumpd3P97770 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Thumpd3P97770 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Thumpd3P97770 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Thumpd3P97770 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.19■□□□□ 0.02
Thumpd3P97770 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Thumpd3P97770 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Thumpd3P97770 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Thumpd3P97770 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Thumpd3P97770 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Thumpd3P97770 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Thumpd3P97770 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Thumpd3P97770 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Thumpd3P97770 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Thumpd3P97770 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Thumpd3P97770 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Thumpd3P97770 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Thumpd3P97770 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Thumpd3P97770 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Thumpd3P97770 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Thumpd3P97770 Gm14722-201ENSMUST00000118943 689 ntBASIC15.18■□□□□ 0.02
Thumpd3P97770 Gm13418-201ENSMUST00000119097 944 ntBASIC15.18■□□□□ 0.02
Thumpd3P97770 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.18■□□□□ 0.02
Thumpd3P97770 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.18■□□□□ 0.02
Thumpd3P97770 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.18■□□□□ 0.02
Thumpd3P97770 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.18■□□□□ 0.02
Thumpd3P97770 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.18■□□□□ 0.02
Thumpd3P97770 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.18■□□□□ 0.02
Thumpd3P97770 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.18■□□□□ 0.02
Thumpd3P97770 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.18■□□□□ 0.02
Thumpd3P97770 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Thumpd3P97770 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.18■□□□□ 0.02
Thumpd3P97770 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Thumpd3P97770 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Thumpd3P97770 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Thumpd3P97770 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Thumpd3P97770 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Thumpd3P97770 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Thumpd3P97770 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Thumpd3P97770 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Thumpd3P97770 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Thumpd3P97770 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Thumpd3P97770 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd3P97770 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Thumpd3P97770 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd3P97770 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd3P97770 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd3P97770 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd3P97770 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Thumpd3P97770 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd3P97770 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd3P97770 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd3P97770 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.17■□□□□ 0.02
Thumpd3P97770 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd3P97770 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd3P97770 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Thumpd3P97770 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.17■□□□□ 0.02
Thumpd3P97770 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.17■□□□□ 0.02
Thumpd3P97770 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd3P97770 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd3P97770 Gm9172-201ENSMUST00000212092 954 ntBASIC15.17■□□□□ 0.02
Thumpd3P97770 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.17■□□□□ 0.02
Thumpd3P97770 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd3P97770 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd3P97770 Gm5867-201ENSMUST00000063197 592 ntBASIC15.17■□□□□ 0.02
Thumpd3P97770 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd3P97770 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd3P97770 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd3P97770 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd3P97770 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd3P97770 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd3P97770 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd3P97770 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd3P97770 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd3P97770 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Thumpd3P97770 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thumpd3P97770 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Thumpd3P97770 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thumpd3P97770 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thumpd3P97770 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thumpd3P97770 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thumpd3P97770 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Thumpd3P97770 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Thumpd3P97770 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms