Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Nkx3-2P97503 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx3-2P97503 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx3-2P97503 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx3-2P97503 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.1□□□□□ -0.15
Nkx3-2P97503 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.1□□□□□ -0.15
Nkx3-2P97503 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx3-2P97503 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.1□□□□□ -0.15
Nkx3-2P97503 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx3-2P97503 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx3-2P97503 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.1□□□□□ -0.15
Nkx3-2P97503 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.1□□□□□ -0.15
Nkx3-2P97503 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx3-2P97503 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx3-2P97503 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx3-2P97503 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx3-2P97503 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx3-2P97503 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.1□□□□□ -0.15
Nkx3-2P97503 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx3-2P97503 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx3-2P97503 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.09□□□□□ -0.15
Nkx3-2P97503 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx3-2P97503 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkx3-2P97503 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkx3-2P97503 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Nkx3-2P97503 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Nkx3-2P97503 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkx3-2P97503 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkx3-2P97503 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx3-2P97503 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx3-2P97503 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx3-2P97503 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx3-2P97503 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Nkx3-2P97503 Gm15920-201ENSMUST00000118998 402 ntBASIC14.08□□□□□ -0.16
Nkx3-2P97503 Gm10499-201ENSMUST00000174094 934 ntBASIC14.08□□□□□ -0.16
Nkx3-2P97503 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.08□□□□□ -0.16
Nkx3-2P97503 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx3-2P97503 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx3-2P97503 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nkx3-2P97503 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx3-2P97503 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx3-2P97503 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.08□□□□□ -0.16
Nkx3-2P97503 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.08□□□□□ -0.16
Nkx3-2P97503 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Nkx3-2P97503 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nkx3-2P97503 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nkx3-2P97503 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nkx3-2P97503 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Nkx3-2P97503 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx3-2P97503 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx3-2P97503 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
Nkx3-2P97503 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.08□□□□□ -0.16
Nkx3-2P97503 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx3-2P97503 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx3-2P97503 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx3-2P97503 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx3-2P97503 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx3-2P97503 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx3-2P97503 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx3-2P97503 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.07□□□□□ -0.16
Nkx3-2P97503 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx3-2P97503 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nkx3-2P97503 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx3-2P97503 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx3-2P97503 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms