Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smarcc1P97496 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smarcc1P97496 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcc1P97496 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcc1P97496 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC18.58■□□□□ 0.56
Smarcc1P97496 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcc1P97496 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC18.58■□□□□ 0.56
Smarcc1P97496 Gm9522-201ENSMUST00000182394 926 ntBASIC18.58■□□□□ 0.56
Smarcc1P97496 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC18.58■□□□□ 0.56
Smarcc1P97496 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC18.58■□□□□ 0.56
Smarcc1P97496 AC149294.4-201ENSMUST00000227870 882 ntBASIC18.58■□□□□ 0.56
Smarcc1P97496 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcc1P97496 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.58■□□□□ 0.56
Smarcc1P97496 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcc1P97496 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcc1P97496 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcc1P97496 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcc1P97496 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcc1P97496 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.58■□□□□ 0.56
Smarcc1P97496 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcc1P97496 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcc1P97496 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcc1P97496 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcc1P97496 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcc1P97496 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcc1P97496 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC18.57■□□□□ 0.56
Smarcc1P97496 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcc1P97496 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC18.57■□□□□ 0.56
Smarcc1P97496 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Smarcc1P97496 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC18.57■□□□□ 0.56
Smarcc1P97496 Gm27631-201ENSMUST00000184163 466 ntBASIC18.57■□□□□ 0.56
Smarcc1P97496 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcc1P97496 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC18.57■□□□□ 0.56
Smarcc1P97496 AC125350.2-201ENSMUST00000224737 727 ntBASIC18.57■□□□□ 0.56
Smarcc1P97496 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcc1P97496 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcc1P97496 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcc1P97496 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcc1P97496 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcc1P97496 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcc1P97496 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcc1P97496 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcc1P97496 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcc1P97496 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcc1P97496 Gm8242-201ENSMUST00000193029 1420 ntBASIC18.57■□□□□ 0.56
Smarcc1P97496 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcc1P97496 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcc1P97496 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc1P97496 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc1P97496 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc1P97496 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc1P97496 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Smarcc1P97496 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc1P97496 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc1P97496 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc1P97496 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc1P97496 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc1P97496 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc1P97496 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC18.56■□□□□ 0.56
Smarcc1P97496 Gm8602-201ENSMUST00000184045 607 ntBASIC18.56■□□□□ 0.56
Smarcc1P97496 Gm45098-201ENSMUST00000207179 657 ntBASIC18.56■□□□□ 0.56
Smarcc1P97496 Gm45668-201ENSMUST00000211271 493 ntBASIC18.56■□□□□ 0.56
Smarcc1P97496 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc1P97496 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc1P97496 Gm15823-201ENSMUST00000064305 670 ntBASIC18.56■□□□□ 0.56
Smarcc1P97496 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc1P97496 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc1P97496 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc1P97496 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc1P97496 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc1P97496 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc1P97496 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.56■□□□□ 0.56
Smarcc1P97496 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc1P97496 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC18.56■□□□□ 0.56
Smarcc1P97496 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Smarcc1P97496 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc1P97496 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc1P97496 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc1P97496 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Smarcc1P97496 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc1P97496 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Smarcc1P97496 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC18.55■□□□□ 0.56
Smarcc1P97496 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcc1P97496 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcc1P97496 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcc1P97496 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Smarcc1P97496 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC18.55■□□□□ 0.56
Smarcc1P97496 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Smarcc1P97496 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcc1P97496 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC18.55■□□□□ 0.56
Smarcc1P97496 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcc1P97496 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcc1P97496 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcc1P97496 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.55■□□□□ 0.56
Smarcc1P97496 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.55■□□□□ 0.56
Smarcc1P97496 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcc1P97496 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.54■□□□□ 0.56
Smarcc1P97496 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Smarcc1P97496 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Smarcc1P97496 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms