Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-1P97436 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.88□□□□□ -0.35
Nkx3-1P97436 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-1P97436 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-1P97436 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-1P97436 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-1P97436 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Nkx3-1P97436 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-1P97436 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nkx3-1P97436 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-1P97436 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-1P97436 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-1P97436 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nkx3-1P97436 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-1P97436 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.88□□□□□ -0.35
Nkx3-1P97436 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-1P97436 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-1P97436 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-1P97436 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-1P97436 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-1P97436 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Nkx3-1P97436 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-1P97436 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.88□□□□□ -0.35
Nkx3-1P97436 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.88□□□□□ -0.35
Nkx3-1P97436 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-1P97436 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Nkx3-1P97436 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-1P97436 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Nkx3-1P97436 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-1P97436 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-1P97436 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-1P97436 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-1P97436 Gm12151-201ENSMUST00000121374 290 ntBASIC12.87□□□□□ -0.35
Nkx3-1P97436 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.87□□□□□ -0.35
Nkx3-1P97436 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-1P97436 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.87□□□□□ -0.35
Nkx3-1P97436 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.87□□□□□ -0.35
Nkx3-1P97436 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-1P97436 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-1P97436 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-1P97436 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-1P97436 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-1P97436 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-1P97436 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-1P97436 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-1P97436 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.87□□□□□ -0.35
Nkx3-1P97436 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-1P97436 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Nkx3-1P97436 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-1P97436 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-1P97436 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-1P97436 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx3-1P97436 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx3-1P97436 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Nkx3-1P97436 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx3-1P97436 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx3-1P97436 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx3-1P97436 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.86□□□□□ -0.35
Nkx3-1P97436 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx3-1P97436 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Nkx3-1P97436 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Nkx3-1P97436 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx3-1P97436 Gm27920-201ENSMUST00000183953 96 ntBASIC12.86□□□□□ -0.35
Nkx3-1P97436 Gm38294-201ENSMUST00000192831 381 ntBASIC12.86□□□□□ -0.35
Nkx3-1P97436 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx3-1P97436 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Nkx3-1P97436 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.86□□□□□ -0.35
Nkx3-1P97436 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Nkx3-1P97436 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx3-1P97436 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Nkx3-1P97436 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx3-1P97436 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx3-1P97436 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Nkx3-1P97436 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx3-1P97436 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx3-1P97436 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Nkx3-1P97436 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx3-1P97436 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx3-1P97436 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.85□□□□□ -0.35
Nkx3-1P97436 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-1P97436 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-1P97436 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-1P97436 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-1P97436 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-1P97436 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Nkx3-1P97436 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-1P97436 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-1P97436 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-1P97436 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.85□□□□□ -0.35
Nkx3-1P97436 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.85□□□□□ -0.35
Nkx3-1P97436 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-1P97436 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-1P97436 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-1P97436 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.85□□□□□ -0.35
Nkx3-1P97436 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.85□□□□□ -0.35
Nkx3-1P97436 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.85□□□□□ -0.35
Nkx3-1P97436 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-1P97436 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.85□□□□□ -0.35
Nkx3-1P97436 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-1P97436 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms