Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
PrkdcP97313 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
PrkdcP97313 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
PrkdcP97313 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC9.99□□□□□ -0.81
PrkdcP97313 Gm43947-201ENSMUST00000203019 959 ntBASIC9.99□□□□□ -0.81
PrkdcP97313 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
PrkdcP97313 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
PrkdcP97313 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
PrkdcP97313 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
PrkdcP97313 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC9.99□□□□□ -0.81
PrkdcP97313 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
PrkdcP97313 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
PrkdcP97313 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC9.99□□□□□ -0.81
PrkdcP97313 Gm22331-201ENSMUST00000158066 136 ntBASIC9.99□□□□□ -0.81
PrkdcP97313 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC9.99□□□□□ -0.81
PrkdcP97313 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
PrkdcP97313 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
PrkdcP97313 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
PrkdcP97313 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
PrkdcP97313 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
PrkdcP97313 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
PrkdcP97313 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC9.99□□□□□ -0.81
PrkdcP97313 Tfap2a-203ENSMUST00000223869 2037 ntBASIC9.99□□□□□ -0.81
PrkdcP97313 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
PrkdcP97313 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC9.99□□□□□ -0.81
PrkdcP97313 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
PrkdcP97313 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
PrkdcP97313 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
PrkdcP97313 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
PrkdcP97313 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PrkdcP97313 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PrkdcP97313 Gm27682-201ENSMUST00000183930 110 ntBASIC9.98□□□□□ -0.81
PrkdcP97313 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PrkdcP97313 AC154462.2-201ENSMUST00000227519 370 ntBASIC9.98□□□□□ -0.81
PrkdcP97313 AC121598.1-201ENSMUST00000228224 1019 ntBASIC9.98□□□□□ -0.81
PrkdcP97313 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
PrkdcP97313 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PrkdcP97313 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
PrkdcP97313 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC9.98□□□□□ -0.81
PrkdcP97313 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC9.98□□□□□ -0.81
PrkdcP97313 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
PrkdcP97313 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
PrkdcP97313 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PrkdcP97313 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
PrkdcP97313 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC9.98□□□□□ -0.81
PrkdcP97313 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC9.98□□□□□ -0.81
PrkdcP97313 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC9.98□□□□□ -0.81
PrkdcP97313 AC121598.2-201ENSMUST00000228376 2325 ntBASIC9.98□□□□□ -0.81
PrkdcP97313 Ntrk2-205ENSMUST00000224402 2284 ntBASIC9.98□□□□□ -0.81
PrkdcP97313 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PrkdcP97313 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
PrkdcP97313 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
PrkdcP97313 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC9.98□□□□□ -0.81
PrkdcP97313 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
PrkdcP97313 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PrkdcP97313 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
PrkdcP97313 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PrkdcP97313 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PrkdcP97313 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC9.98□□□□□ -0.81
PrkdcP97313 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PrkdcP97313 Gm11524-201ENSMUST00000119349 807 ntBASIC9.97□□□□□ -0.81
PrkdcP97313 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PrkdcP97313 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PrkdcP97313 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
PrkdcP97313 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
PrkdcP97313 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PrkdcP97313 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PrkdcP97313 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PrkdcP97313 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
PrkdcP97313 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
PrkdcP97313 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PrkdcP97313 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PrkdcP97313 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC9.97□□□□□ -0.81
PrkdcP97313 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
PrkdcP97313 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC9.97□□□□□ -0.81
PrkdcP97313 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PrkdcP97313 Gm29649-201ENSMUST00000185649 419 ntBASIC9.97□□□□□ -0.81
PrkdcP97313 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PrkdcP97313 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
PrkdcP97313 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PrkdcP97313 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
PrkdcP97313 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.81
PrkdcP97313 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC9.97□□□□□ -0.81
PrkdcP97313 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PrkdcP97313 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC9.97□□□□□ -0.81
PrkdcP97313 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
PrkdcP97313 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
PrkdcP97313 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC9.97□□□□□ -0.81
PrkdcP97313 Rps4l-202ENSMUST00000204242 789 ntBASIC9.97□□□□□ -0.81
PrkdcP97313 Gm6082-201ENSMUST00000215204 454 ntBASIC9.97□□□□□ -0.81
PrkdcP97313 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC9.97□□□□□ -0.81
PrkdcP97313 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PrkdcP97313 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
PrkdcP97313 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PrkdcP97313 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PrkdcP97313 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
PrkdcP97313 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PrkdcP97313 Gm15393-201ENSMUST00000120499 219 ntBASIC9.97□□□□□ -0.81
PrkdcP97313 Gm7029-201ENSMUST00000173226 450 ntBASIC9.97□□□□□ -0.81
PrkdcP97313 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms