Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.53□□□□□ -0.4
SgcaP82350 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SgcaP82350 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SgcaP82350 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SgcaP82350 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.53□□□□□ -0.4
SgcaP82350 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SgcaP82350 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SgcaP82350 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SgcaP82350 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SgcaP82350 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
SgcaP82350 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SgcaP82350 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SgcaP82350 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SgcaP82350 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SgcaP82350 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SgcaP82350 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
SgcaP82350 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SgcaP82350 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SgcaP82350 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SgcaP82350 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SgcaP82350 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.52□□□□□ -0.4
SgcaP82350 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SgcaP82350 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SgcaP82350 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SgcaP82350 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
SgcaP82350 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SgcaP82350 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SgcaP82350 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.52□□□□□ -0.41
SgcaP82350 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.52□□□□□ -0.41
SgcaP82350 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.52□□□□□ -0.41
SgcaP82350 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SgcaP82350 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SgcaP82350 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SgcaP82350 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SgcaP82350 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.52□□□□□ -0.41
SgcaP82350 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SgcaP82350 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SgcaP82350 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SgcaP82350 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SgcaP82350 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SgcaP82350 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SgcaP82350 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SgcaP82350 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SgcaP82350 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SgcaP82350 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SgcaP82350 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SgcaP82350 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SgcaP82350 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SgcaP82350 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SgcaP82350 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SgcaP82350 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SgcaP82350 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SgcaP82350 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SgcaP82350 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.51□□□□□ -0.41
SgcaP82350 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
SgcaP82350 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.51□□□□□ -0.41
SgcaP82350 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.51□□□□□ -0.41
SgcaP82350 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SgcaP82350 Gm9987-201ENSMUST00000069768 567 ntBASIC12.51□□□□□ -0.41
SgcaP82350 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
SgcaP82350 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.51□□□□□ -0.41
SgcaP82350 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SgcaP82350 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SgcaP82350 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SgcaP82350 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SgcaP82350 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SgcaP82350 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SgcaP82350 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
SgcaP82350 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SgcaP82350 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SgcaP82350 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SgcaP82350 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.51□□□□□ -0.41
SgcaP82350 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SgcaP82350 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SgcaP82350 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SgcaP82350 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.5□□□□□ -0.41
SgcaP82350 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
SgcaP82350 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcaP82350 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcaP82350 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcaP82350 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcaP82350 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
SgcaP82350 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcaP82350 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
SgcaP82350 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcaP82350 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
SgcaP82350 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcaP82350 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcaP82350 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcaP82350 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.5□□□□□ -0.41
SgcaP82350 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SgcaP82350 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
SgcaP82350 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SgcaP82350 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SgcaP82350 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcaP82350 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcaP82350 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcaP82350 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcaP82350 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SgcaP82350 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms