Protein–RNA interactions for Protein: P70279

Surf6, Surfeit locus protein 6, mousemouse

Known RBP Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf6P70279 Gm8587-201ENSMUST00000076538 843 ntBASIC15.54■□□□□ 0.08
Surf6P70279 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Surf6P70279 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
Surf6P70279 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Surf6P70279 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Surf6P70279 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Surf6P70279 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Surf6P70279 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Surf6P70279 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Surf6P70279 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Surf6P70279 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Surf6P70279 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Surf6P70279 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Surf6P70279 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Surf6P70279 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.53■□□□□ 0.08
Surf6P70279 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.53■□□□□ 0.08
Surf6P70279 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.53■□□□□ 0.08
Surf6P70279 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Surf6P70279 Gm7213-201ENSMUST00000215977 950 ntBASIC15.53■□□□□ 0.08
Surf6P70279 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Surf6P70279 Gm10819-201ENSMUST00000099988 561 ntBASIC15.53■□□□□ 0.08
Surf6P70279 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Surf6P70279 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Surf6P70279 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Surf6P70279 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.53■□□□□ 0.08
Surf6P70279 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Surf6P70279 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Surf6P70279 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Surf6P70279 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Surf6P70279 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Surf6P70279 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Surf6P70279 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Surf6P70279 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Surf6P70279 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Surf6P70279 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Surf6P70279 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Surf6P70279 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Surf6P70279 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Surf6P70279 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Surf6P70279 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Surf6P70279 Gm44430-201ENSMUST00000203376 995 ntBASIC15.52■□□□□ 0.08
Surf6P70279 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.52■□□□□ 0.08
Surf6P70279 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Surf6P70279 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Surf6P70279 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Surf6P70279 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Surf6P70279 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Surf6P70279 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Surf6P70279 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Surf6P70279 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Surf6P70279 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Surf6P70279 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Surf6P70279 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Surf6P70279 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Surf6P70279 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Surf6P70279 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Surf6P70279 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Surf6P70279 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Surf6P70279 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Surf6P70279 Gm14722-201ENSMUST00000118943 689 ntBASIC15.51■□□□□ 0.07
Surf6P70279 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Surf6P70279 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Surf6P70279 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Surf6P70279 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Surf6P70279 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Surf6P70279 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Surf6P70279 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Surf6P70279 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Surf6P70279 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Surf6P70279 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Surf6P70279 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Surf6P70279 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Surf6P70279 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.51■□□□□ 0.07
Surf6P70279 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Surf6P70279 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.51■□□□□ 0.07
Surf6P70279 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Surf6P70279 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.5■□□□□ 0.07
Surf6P70279 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Surf6P70279 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Surf6P70279 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Surf6P70279 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Surf6P70279 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Surf6P70279 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Surf6P70279 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Surf6P70279 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Surf6P70279 Gm9013-201ENSMUST00000132939 882 ntBASIC15.5■□□□□ 0.07
Surf6P70279 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.5■□□□□ 0.07
Surf6P70279 Gm10052-201ENSMUST00000168019 960 ntBASIC15.5■□□□□ 0.07
Surf6P70279 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.5■□□□□ 0.07
Surf6P70279 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.5■□□□□ 0.07
Surf6P70279 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.5■□□□□ 0.07
Surf6P70279 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.5■□□□□ 0.07
Surf6P70279 Gm7729-201ENSMUST00000050143 801 ntBASIC15.5■□□□□ 0.07
Surf6P70279 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Surf6P70279 Gm10566-201ENSMUST00000086739 996 ntBASIC15.5■□□□□ 0.07
Surf6P70279 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Surf6P70279 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Surf6P70279 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Surf6P70279 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Surf6P70279 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms