Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim4P70271 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.42□□□□□ -0.42
Pdlim4P70271 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pdlim4P70271 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim4P70271 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim4P70271 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim4P70271 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim4P70271 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.42□□□□□ -0.42
Pdlim4P70271 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.42□□□□□ -0.42
Pdlim4P70271 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim4P70271 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim4P70271 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim4P70271 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim4P70271 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pdlim4P70271 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim4P70271 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim4P70271 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Pdlim4P70271 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim4P70271 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim4P70271 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim4P70271 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pdlim4P70271 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim4P70271 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim4P70271 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim4P70271 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.42□□□□□ -0.42
Pdlim4P70271 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim4P70271 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim4P70271 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.42□□□□□ -0.42
Pdlim4P70271 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim4P70271 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim4P70271 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim4P70271 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim4P70271 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim4P70271 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim4P70271 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pdlim4P70271 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim4P70271 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim4P70271 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.41□□□□□ -0.42
Pdlim4P70271 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim4P70271 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim4P70271 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pdlim4P70271 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim4P70271 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pdlim4P70271 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pdlim4P70271 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim4P70271 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim4P70271 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Pdlim4P70271 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Pdlim4P70271 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim4P70271 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pdlim4P70271 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim4P70271 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.41□□□□□ -0.42
Pdlim4P70271 Gm27300-201ENSMUST00000184085 97 ntBASIC12.41□□□□□ -0.42
Pdlim4P70271 Gm27335-201ENSMUST00000184758 97 ntBASIC12.41□□□□□ -0.42
Pdlim4P70271 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim4P70271 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim4P70271 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim4P70271 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.41□□□□□ -0.42
Pdlim4P70271 Gm18246-201ENSMUST00000221023 728 ntBASIC12.41□□□□□ -0.42
Pdlim4P70271 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim4P70271 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim4P70271 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim4P70271 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pdlim4P70271 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim4P70271 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim4P70271 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim4P70271 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Pdlim4P70271 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.41□□□□□ -0.42
Pdlim4P70271 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Pdlim4P70271 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pdlim4P70271 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim4P70271 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim4P70271 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim4P70271 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim4P70271 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim4P70271 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.41□□□□□ -0.42
Pdlim4P70271 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim4P70271 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.41□□□□□ -0.42
Pdlim4P70271 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Pdlim4P70271 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim4P70271 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim4P70271 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim4P70271 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim4P70271 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pdlim4P70271 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim4P70271 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.4□□□□□ -0.42
Pdlim4P70271 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim4P70271 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim4P70271 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Pdlim4P70271 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim4P70271 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim4P70271 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Pdlim4P70271 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim4P70271 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.4□□□□□ -0.42
Pdlim4P70271 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim4P70271 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim4P70271 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim4P70271 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim4P70271 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim4P70271 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms