Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Crnkl1P63154 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Crnkl1P63154 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Crnkl1P63154 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Crnkl1P63154 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Crnkl1P63154 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Crnkl1P63154 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Crnkl1P63154 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Crnkl1P63154 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Crnkl1P63154 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Crnkl1P63154 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Crnkl1P63154 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.8□□□□□ -0.04
Crnkl1P63154 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.8□□□□□ -0.04
Crnkl1P63154 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Crnkl1P63154 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Crnkl1P63154 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.8□□□□□ -0.04
Crnkl1P63154 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Crnkl1P63154 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Crnkl1P63154 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.8□□□□□ -0.04
Crnkl1P63154 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Crnkl1P63154 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Crnkl1P63154 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Crnkl1P63154 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Crnkl1P63154 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Crnkl1P63154 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Crnkl1P63154 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Crnkl1P63154 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Crnkl1P63154 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Crnkl1P63154 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Crnkl1P63154 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Crnkl1P63154 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.8□□□□□ -0.04
Crnkl1P63154 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Crnkl1P63154 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Crnkl1P63154 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Crnkl1P63154 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Crnkl1P63154 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Crnkl1P63154 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Crnkl1P63154 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Crnkl1P63154 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Crnkl1P63154 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Crnkl1P63154 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Crnkl1P63154 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.79□□□□□ -0.04
Crnkl1P63154 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Crnkl1P63154 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Crnkl1P63154 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Crnkl1P63154 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Crnkl1P63154 Gm6257-201ENSMUST00000163864 910 ntBASIC14.79□□□□□ -0.04
Crnkl1P63154 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
Crnkl1P63154 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Crnkl1P63154 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.79□□□□□ -0.04
Crnkl1P63154 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.79□□□□□ -0.04
Crnkl1P63154 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.79□□□□□ -0.04
Crnkl1P63154 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.79□□□□□ -0.04
Crnkl1P63154 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Crnkl1P63154 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Crnkl1P63154 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Crnkl1P63154 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Crnkl1P63154 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Crnkl1P63154 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Crnkl1P63154 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Crnkl1P63154 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Crnkl1P63154 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Crnkl1P63154 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Crnkl1P63154 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Crnkl1P63154 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Crnkl1P63154 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Crnkl1P63154 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Crnkl1P63154 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Crnkl1P63154 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Crnkl1P63154 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Crnkl1P63154 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Crnkl1P63154 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Crnkl1P63154 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.78□□□□□ -0.04
Crnkl1P63154 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Crnkl1P63154 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.78□□□□□ -0.04
Crnkl1P63154 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Crnkl1P63154 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Crnkl1P63154 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Crnkl1P63154 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Crnkl1P63154 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Crnkl1P63154 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.78□□□□□ -0.04
Crnkl1P63154 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Crnkl1P63154 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Crnkl1P63154 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Crnkl1P63154 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Crnkl1P63154 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Crnkl1P63154 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Crnkl1P63154 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Crnkl1P63154 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Crnkl1P63154 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Crnkl1P63154 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.78□□□□□ -0.04
Crnkl1P63154 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.78□□□□□ -0.04
Crnkl1P63154 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Crnkl1P63154 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Crnkl1P63154 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Crnkl1P63154 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Crnkl1P63154 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Crnkl1P63154 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Crnkl1P63154 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Crnkl1P63154 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms