Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ybx1P62960 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ybx1P62960 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ybx1P62960 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ybx1P62960 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ybx1P62960 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Ybx1P62960 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ybx1P62960 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ybx1P62960 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ybx1P62960 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ybx1P62960 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ybx1P62960 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ybx1P62960 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.25■□□□□ 0.03
Ybx1P62960 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ybx1P62960 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ybx1P62960 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ybx1P62960 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ybx1P62960 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ybx1P62960 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.25■□□□□ 0.03
Ybx1P62960 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Ybx1P62960 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Ybx1P62960 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Ybx1P62960 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.25■□□□□ 0.03
Ybx1P62960 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ybx1P62960 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ybx1P62960 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.25■□□□□ 0.03
Ybx1P62960 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ybx1P62960 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ybx1P62960 BC037039-201ENSMUST00000192003 2205 ntBASIC15.25■□□□□ 0.03
Ybx1P62960 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.25■□□□□ 0.03
Ybx1P62960 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ybx1P62960 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ybx1P62960 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ybx1P62960 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ybx1P62960 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ybx1P62960 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ybx1P62960 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ybx1P62960 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ybx1P62960 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ybx1P62960 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ybx1P62960 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ybx1P62960 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ybx1P62960 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ybx1P62960 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ybx1P62960 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ybx1P62960 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ybx1P62960 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.24■□□□□ 0.03
Ybx1P62960 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ybx1P62960 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ybx1P62960 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ybx1P62960 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.24■□□□□ 0.03
Ybx1P62960 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Ybx1P62960 Mir7684-201ENSMUST00000183858 60 ntBASIC15.24■□□□□ 0.03
Ybx1P62960 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ybx1P62960 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ybx1P62960 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ybx1P62960 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ybx1P62960 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ybx1P62960 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ybx1P62960 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ybx1P62960 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Ybx1P62960 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ybx1P62960 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ybx1P62960 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ybx1P62960 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ybx1P62960 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ybx1P62960 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ybx1P62960 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ybx1P62960 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Ybx1P62960 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ybx1P62960 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.24■□□□□ 0.03
Ybx1P62960 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ybx1P62960 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ybx1P62960 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.23■□□□□ 0.03
Ybx1P62960 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.23■□□□□ 0.03
Ybx1P62960 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ybx1P62960 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ybx1P62960 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ybx1P62960 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ybx1P62960 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ybx1P62960 Gm15487-201ENSMUST00000122373 465 ntBASIC15.23■□□□□ 0.03
Ybx1P62960 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ybx1P62960 Gm9063-201ENSMUST00000223299 582 ntBASIC15.23■□□□□ 0.03
Ybx1P62960 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.23■□□□□ 0.03
Ybx1P62960 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ybx1P62960 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ybx1P62960 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ybx1P62960 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ybx1P62960 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Ybx1P62960 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ybx1P62960 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ybx1P62960 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ybx1P62960 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ybx1P62960 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ybx1P62960 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ybx1P62960 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ybx1P62960 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ybx1P62960 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ybx1P62960 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ybx1P62960 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms