Protein–RNA interactions for Protein: P62878

Rbx1, E3 ubiquitin-protein ligase RBX1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbx1P62878 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rbx1P62878 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rbx1P62878 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rbx1P62878 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rbx1P62878 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rbx1P62878 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rbx1P62878 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rbx1P62878 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rbx1P62878 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rbx1P62878 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rbx1P62878 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rbx1P62878 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rbx1P62878 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rbx1P62878 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.05□□□□□ -0.64
Rbx1P62878 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Rbx1P62878 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rbx1P62878 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rbx1P62878 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rbx1P62878 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rbx1P62878 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rbx1P62878 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Rbx1P62878 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rbx1P62878 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC11.05□□□□□ -0.64
Rbx1P62878 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Rbx1P62878 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rbx1P62878 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Rbx1P62878 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rbx1P62878 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rbx1P62878 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rbx1P62878 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rbx1P62878 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rbx1P62878 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Rbx1P62878 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rbx1P62878 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rbx1P62878 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rbx1P62878 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.05□□□□□ -0.64
Rbx1P62878 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.05□□□□□ -0.64
Rbx1P62878 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rbx1P62878 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rbx1P62878 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rbx1P62878 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC11.05□□□□□ -0.64
Rbx1P62878 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rbx1P62878 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rbx1P62878 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Rbx1P62878 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rbx1P62878 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rbx1P62878 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rbx1P62878 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rbx1P62878 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Rbx1P62878 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rbx1P62878 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rbx1P62878 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Rbx1P62878 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC11.04□□□□□ -0.64
Rbx1P62878 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC11.04□□□□□ -0.64
Rbx1P62878 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Rbx1P62878 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rbx1P62878 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rbx1P62878 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rbx1P62878 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rbx1P62878 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rbx1P62878 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rbx1P62878 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Rbx1P62878 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rbx1P62878 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rbx1P62878 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rbx1P62878 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rbx1P62878 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rbx1P62878 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rbx1P62878 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rbx1P62878 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC11.04□□□□□ -0.64
Rbx1P62878 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Rbx1P62878 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rbx1P62878 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Rbx1P62878 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Rbx1P62878 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rbx1P62878 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Rbx1P62878 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rbx1P62878 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rbx1P62878 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Rbx1P62878 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rbx1P62878 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Rbx1P62878 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.03□□□□□ -0.64
Rbx1P62878 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rbx1P62878 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Rbx1P62878 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rbx1P62878 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rbx1P62878 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
Rbx1P62878 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rbx1P62878 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rbx1P62878 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rbx1P62878 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rbx1P62878 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC11.03□□□□□ -0.64
Rbx1P62878 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rbx1P62878 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Rbx1P62878 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rbx1P62878 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC11.03□□□□□ -0.64
Rbx1P62878 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Rbx1P62878 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC11.03□□□□□ -0.64
Rbx1P62878 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC11.03□□□□□ -0.64
Rbx1P62878 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms