Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sssca1P56873 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sssca1P56873 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sssca1P56873 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sssca1P56873 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sssca1P56873 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Sssca1P56873 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Sssca1P56873 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sssca1P56873 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Sssca1P56873 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Sssca1P56873 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sssca1P56873 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sssca1P56873 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.08□□□□□ -0.48
Sssca1P56873 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sssca1P56873 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sssca1P56873 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sssca1P56873 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sssca1P56873 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sssca1P56873 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sssca1P56873 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sssca1P56873 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sssca1P56873 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.07□□□□□ -0.48
Sssca1P56873 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sssca1P56873 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sssca1P56873 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sssca1P56873 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sssca1P56873 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sssca1P56873 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sssca1P56873 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sssca1P56873 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sssca1P56873 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Sssca1P56873 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sssca1P56873 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.07□□□□□ -0.48
Sssca1P56873 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sssca1P56873 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sssca1P56873 Gm8655-201ENSMUST00000221159 852 ntBASIC12.07□□□□□ -0.48
Sssca1P56873 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Sssca1P56873 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sssca1P56873 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Sssca1P56873 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sssca1P56873 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.07□□□□□ -0.48
Sssca1P56873 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sssca1P56873 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sssca1P56873 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sssca1P56873 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.07□□□□□ -0.48
Sssca1P56873 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.07□□□□□ -0.48
Sssca1P56873 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sssca1P56873 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sssca1P56873 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sssca1P56873 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sssca1P56873 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sssca1P56873 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sssca1P56873 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sssca1P56873 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sssca1P56873 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sssca1P56873 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sssca1P56873 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sssca1P56873 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sssca1P56873 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sssca1P56873 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sssca1P56873 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.06□□□□□ -0.48
Sssca1P56873 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Sssca1P56873 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.06□□□□□ -0.48
Sssca1P56873 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.06□□□□□ -0.48
Sssca1P56873 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Sssca1P56873 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sssca1P56873 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sssca1P56873 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sssca1P56873 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sssca1P56873 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sssca1P56873 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Sssca1P56873 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sssca1P56873 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sssca1P56873 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.06□□□□□ -0.48
Sssca1P56873 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.06□□□□□ -0.48
Sssca1P56873 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.06□□□□□ -0.48
Sssca1P56873 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sssca1P56873 Gm27867-201ENSMUST00000184778 125 ntBASIC12.06□□□□□ -0.48
Sssca1P56873 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.06□□□□□ -0.48
Sssca1P56873 Gm7506-201ENSMUST00000207758 815 ntBASIC12.06□□□□□ -0.48
Sssca1P56873 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.06□□□□□ -0.48
Sssca1P56873 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.06□□□□□ -0.48
Sssca1P56873 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sssca1P56873 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sssca1P56873 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Sssca1P56873 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sssca1P56873 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sssca1P56873 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sssca1P56873 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sssca1P56873 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sssca1P56873 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.06□□□□□ -0.48
Sssca1P56873 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sssca1P56873 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sssca1P56873 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Sssca1P56873 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Sssca1P56873 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sssca1P56873 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sssca1P56873 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sssca1P56873 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sssca1P56873 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms