Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Irf5P56477 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Irf5P56477 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Irf5P56477 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Irf5P56477 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Irf5P56477 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Irf5P56477 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.68■□□□□ 0.42
Irf5P56477 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.68■□□□□ 0.42
Irf5P56477 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.68■□□□□ 0.42
Irf5P56477 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.68■□□□□ 0.42
Irf5P56477 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Irf5P56477 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Irf5P56477 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Irf5P56477 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Irf5P56477 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Irf5P56477 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Irf5P56477 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Irf5P56477 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Irf5P56477 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Irf5P56477 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC17.67■□□□□ 0.42
Irf5P56477 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Irf5P56477 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Irf5P56477 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Irf5P56477 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Irf5P56477 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Irf5P56477 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC17.67■□□□□ 0.42
Irf5P56477 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Irf5P56477 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Irf5P56477 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Irf5P56477 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.67■□□□□ 0.42
Irf5P56477 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Irf5P56477 Gm20553-201ENSMUST00000204205 844 ntBASIC17.67■□□□□ 0.42
Irf5P56477 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.67■□□□□ 0.42
Irf5P56477 Arhgef33-209ENSMUST00000225223 714 ntBASIC17.67■□□□□ 0.42
Irf5P56477 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.67■□□□□ 0.42
Irf5P56477 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.67■□□□□ 0.42
Irf5P56477 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Irf5P56477 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Irf5P56477 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Irf5P56477 Ntrk2-208ENSMUST00000225583 2719 ntBASIC17.67■□□□□ 0.42
Irf5P56477 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Irf5P56477 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.67■□□□□ 0.42
Irf5P56477 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Irf5P56477 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.66■□□□□ 0.42
Irf5P56477 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Irf5P56477 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Irf5P56477 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Irf5P56477 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Irf5P56477 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Irf5P56477 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Irf5P56477 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Irf5P56477 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Irf5P56477 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Irf5P56477 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Irf5P56477 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Irf5P56477 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Irf5P56477 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Irf5P56477 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.66■□□□□ 0.42
Irf5P56477 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.66■□□□□ 0.42
Irf5P56477 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Irf5P56477 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Irf5P56477 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.66■□□□□ 0.42
Irf5P56477 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Irf5P56477 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Irf5P56477 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Irf5P56477 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Irf5P56477 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Irf5P56477 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Irf5P56477 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Irf5P56477 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Irf5P56477 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Irf5P56477 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Irf5P56477 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.65■□□□□ 0.42
Irf5P56477 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Irf5P56477 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Irf5P56477 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Irf5P56477 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Irf5P56477 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Irf5P56477 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Irf5P56477 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Irf5P56477 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC17.65■□□□□ 0.42
Irf5P56477 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Irf5P56477 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Irf5P56477 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Irf5P56477 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Irf5P56477 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Irf5P56477 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Irf5P56477 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Irf5P56477 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.65■□□□□ 0.42
Irf5P56477 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.65■□□□□ 0.42
Irf5P56477 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Irf5P56477 Gm22175-201ENSMUST00000175007 78 ntBASIC17.65■□□□□ 0.42
Irf5P56477 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Irf5P56477 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.65■□□□□ 0.42
Irf5P56477 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.65■□□□□ 0.42
Irf5P56477 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.65■□□□□ 0.42
Irf5P56477 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Irf5P56477 Gm25007-201ENSMUST00000083808 133 ntBASIC17.65■□□□□ 0.42
Irf5P56477 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.65■□□□□ 0.42
Irf5P56477 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms