Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox3P53784 Gm5866-201ENSMUST00000177881 973 ntBASIC14.3□□□□□ -0.12
Sox3P53784 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox3P53784 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox3P53784 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox3P53784 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.3□□□□□ -0.12
Sox3P53784 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox3P53784 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox3P53784 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox3P53784 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox3P53784 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox3P53784 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox3P53784 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox3P53784 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox3P53784 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox3P53784 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox3P53784 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox3P53784 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox3P53784 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox3P53784 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox3P53784 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox3P53784 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox3P53784 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
Sox3P53784 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox3P53784 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox3P53784 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox3P53784 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox3P53784 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox3P53784 Mir449b-201ENSMUST00000104833 80 ntBASIC14.29□□□□□ -0.12
Sox3P53784 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox3P53784 Gm14127-201ENSMUST00000117906 678 ntBASIC14.29□□□□□ -0.12
Sox3P53784 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox3P53784 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.29□□□□□ -0.12
Sox3P53784 Gm27301-201ENSMUST00000184012 127 ntBASIC14.29□□□□□ -0.12
Sox3P53784 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.29□□□□□ -0.12
Sox3P53784 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.29□□□□□ -0.12
Sox3P53784 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.29□□□□□ -0.12
Sox3P53784 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox3P53784 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox3P53784 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox3P53784 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox3P53784 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox3P53784 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Sox3P53784 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox3P53784 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox3P53784 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.29□□□□□ -0.12
Sox3P53784 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox3P53784 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox3P53784 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox3P53784 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.29□□□□□ -0.12
Sox3P53784 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox3P53784 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox3P53784 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox3P53784 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox3P53784 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox3P53784 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox3P53784 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox3P53784 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox3P53784 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox3P53784 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox3P53784 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox3P53784 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox3P53784 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox3P53784 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox3P53784 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox3P53784 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox3P53784 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox3P53784 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Sox3P53784 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox3P53784 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox3P53784 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.28□□□□□ -0.12
Sox3P53784 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox3P53784 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Sox3P53784 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Sox3P53784 Gm18889-201ENSMUST00000174284 929 ntBASIC14.28□□□□□ -0.12
Sox3P53784 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.28□□□□□ -0.12
Sox3P53784 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.28□□□□□ -0.12
Sox3P53784 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox3P53784 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Sox3P53784 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.28□□□□□ -0.12
Sox3P53784 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox3P53784 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox3P53784 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox3P53784 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox3P53784 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.28□□□□□ -0.12
Sox3P53784 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Sox3P53784 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox3P53784 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox3P53784 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox3P53784 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox3P53784 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox3P53784 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox3P53784 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox3P53784 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox3P53784 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox3P53784 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox3P53784 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.27□□□□□ -0.12
Sox3P53784 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox3P53784 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Sox3P53784 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms