Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 Gm5303-201ENSMUST00000117943 1252 ntBASIC16.1■□□□□ 0.17
SqleP52019 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC16.1■□□□□ 0.17
SqleP52019 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SqleP52019 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SqleP52019 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.1■□□□□ 0.17
SqleP52019 Gm5356-201ENSMUST00000093326 615 ntBASIC16.1■□□□□ 0.17
SqleP52019 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SqleP52019 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SqleP52019 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SqleP52019 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SqleP52019 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SqleP52019 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SqleP52019 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SqleP52019 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SqleP52019 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SqleP52019 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SqleP52019 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SqleP52019 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SqleP52019 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SqleP52019 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SqleP52019 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SqleP52019 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SqleP52019 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC16.09■□□□□ 0.17
SqleP52019 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SqleP52019 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SqleP52019 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SqleP52019 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.09■□□□□ 0.17
SqleP52019 Gm13216-201ENSMUST00000117145 591 ntBASIC16.09■□□□□ 0.17
SqleP52019 Gm13392-201ENSMUST00000117708 150 ntBASIC16.09■□□□□ 0.17
SqleP52019 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SqleP52019 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC16.09■□□□□ 0.17
SqleP52019 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SqleP52019 Gm8835-201ENSMUST00000173096 1169 ntBASIC16.09■□□□□ 0.17
SqleP52019 Gm5354-201ENSMUST00000182417 973 ntBASIC16.09■□□□□ 0.17
SqleP52019 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.09■□□□□ 0.17
SqleP52019 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SqleP52019 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SqleP52019 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SqleP52019 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SqleP52019 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SqleP52019 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SqleP52019 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SqleP52019 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SqleP52019 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SqleP52019 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SqleP52019 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SqleP52019 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SqleP52019 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SqleP52019 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
SqleP52019 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SqleP52019 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SqleP52019 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SqleP52019 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
SqleP52019 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SqleP52019 Gm12390-201ENSMUST00000117897 397 ntBASIC16.08■□□□□ 0.16
SqleP52019 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
SqleP52019 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SqleP52019 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.08■□□□□ 0.16
SqleP52019 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SqleP52019 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.08■□□□□ 0.16
SqleP52019 Gm42693-201ENSMUST00000196779 631 ntBASIC16.08■□□□□ 0.16
SqleP52019 Gm45098-201ENSMUST00000207179 657 ntBASIC16.08■□□□□ 0.16
SqleP52019 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SqleP52019 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SqleP52019 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SqleP52019 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SqleP52019 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SqleP52019 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SqleP52019 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SqleP52019 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SqleP52019 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SqleP52019 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SqleP52019 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SqleP52019 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SqleP52019 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SqleP52019 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SqleP52019 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SqleP52019 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SqleP52019 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SqleP52019 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SqleP52019 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.07■□□□□ 0.16
SqleP52019 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SqleP52019 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SqleP52019 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.07■□□□□ 0.16
SqleP52019 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SqleP52019 Mir692-1-201ENSMUST00000102263 109 ntBASIC16.07■□□□□ 0.16
SqleP52019 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.07■□□□□ 0.16
SqleP52019 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC16.07■□□□□ 0.16
SqleP52019 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.07■□□□□ 0.16
SqleP52019 Gm9257-201ENSMUST00000221254 232 ntBASIC16.07■□□□□ 0.16
SqleP52019 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.07■□□□□ 0.16
SqleP52019 AC155252.1-201ENSMUST00000226462 1208 ntBASIC16.07■□□□□ 0.16
SqleP52019 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
SqleP52019 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SqleP52019 Gm10478-201ENSMUST00000084451 396 ntBASIC16.07■□□□□ 0.16
SqleP52019 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SqleP52019 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SqleP52019 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SqleP52019 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SqleP52019 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms