Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atoh1P48985 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atoh1P48985 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Atoh1P48985 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atoh1P48985 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.75■□□□□ 0.27
Atoh1P48985 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atoh1P48985 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Atoh1P48985 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Atoh1P48985 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atoh1P48985 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.75■□□□□ 0.27
Atoh1P48985 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atoh1P48985 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atoh1P48985 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atoh1P48985 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atoh1P48985 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atoh1P48985 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atoh1P48985 Gm12960-201ENSMUST00000120017 1066 ntBASIC16.75■□□□□ 0.27
Atoh1P48985 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Atoh1P48985 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Atoh1P48985 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Atoh1P48985 Gm9002-201ENSMUST00000178437 499 ntBASIC16.75■□□□□ 0.27
Atoh1P48985 Mir6420-201ENSMUST00000185032 102 ntBASIC16.75■□□□□ 0.27
Atoh1P48985 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Atoh1P48985 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.75■□□□□ 0.27
Atoh1P48985 Gm19220-201ENSMUST00000222682 803 ntBASIC16.75■□□□□ 0.27
Atoh1P48985 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.75■□□□□ 0.27
Atoh1P48985 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.75■□□□□ 0.27
Atoh1P48985 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atoh1P48985 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atoh1P48985 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atoh1P48985 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atoh1P48985 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Atoh1P48985 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atoh1P48985 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atoh1P48985 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.75■□□□□ 0.27
Atoh1P48985 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.74■□□□□ 0.27
Atoh1P48985 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atoh1P48985 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atoh1P48985 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atoh1P48985 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Atoh1P48985 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Atoh1P48985 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atoh1P48985 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Atoh1P48985 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atoh1P48985 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.74■□□□□ 0.27
Atoh1P48985 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC16.74■□□□□ 0.27
Atoh1P48985 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Atoh1P48985 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.74■□□□□ 0.27
Atoh1P48985 Gm2451-201ENSMUST00000199447 999 ntBASIC16.74■□□□□ 0.27
Atoh1P48985 Gm10290-201ENSMUST00000200451 999 ntBASIC16.74■□□□□ 0.27
Atoh1P48985 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.74■□□□□ 0.27
Atoh1P48985 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atoh1P48985 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Atoh1P48985 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atoh1P48985 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atoh1P48985 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atoh1P48985 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atoh1P48985 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atoh1P48985 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Atoh1P48985 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atoh1P48985 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atoh1P48985 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atoh1P48985 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atoh1P48985 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atoh1P48985 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atoh1P48985 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC16.73■□□□□ 0.27
Atoh1P48985 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atoh1P48985 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Atoh1P48985 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atoh1P48985 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.73■□□□□ 0.27
Atoh1P48985 AY702102-202ENSMUST00000194651 1173 ntBASIC16.73■□□□□ 0.27
Atoh1P48985 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atoh1P48985 Mir125a-201ENSMUST00000083545 68 ntBASIC16.73■□□□□ 0.27
Atoh1P48985 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Atoh1P48985 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atoh1P48985 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atoh1P48985 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atoh1P48985 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atoh1P48985 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Atoh1P48985 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atoh1P48985 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atoh1P48985 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.72■□□□□ 0.27
Atoh1P48985 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atoh1P48985 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Atoh1P48985 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Atoh1P48985 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atoh1P48985 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Atoh1P48985 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atoh1P48985 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.72■□□□□ 0.27
Atoh1P48985 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.72■□□□□ 0.27
Atoh1P48985 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atoh1P48985 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.72■□□□□ 0.27
Atoh1P48985 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Atoh1P48985 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atoh1P48985 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.72■□□□□ 0.27
Atoh1P48985 Gm5035-201ENSMUST00000215581 927 ntBASIC16.72■□□□□ 0.27
Atoh1P48985 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Atoh1P48985 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.72■□□□□ 0.27
Atoh1P48985 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Atoh1P48985 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms