Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Mir7654-201ENSMUST00000185082 70 ntBASIC16.5■□□□□ 0.23
Brca1P48754 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC16.5■□□□□ 0.23
Brca1P48754 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Brca1P48754 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Brca1P48754 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Brca1P48754 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Brca1P48754 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Brca1P48754 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Brca1P48754 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Brca1P48754 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Brca1P48754 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Brca1P48754 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Brca1P48754 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Brca1P48754 Mir692-1-201ENSMUST00000102263 109 ntBASIC16.49■□□□□ 0.23
Brca1P48754 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Brca1P48754 Gm18827-201ENSMUST00000188341 790 ntBASIC16.49■□□□□ 0.23
Brca1P48754 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Brca1P48754 Gm8399-201ENSMUST00000082300 1117 ntBASIC16.49■□□□□ 0.23
Brca1P48754 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Brca1P48754 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Brca1P48754 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Brca1P48754 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Brca1P48754 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Brca1P48754 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Brca1P48754 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Brca1P48754 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Brca1P48754 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Brca1P48754 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Brca1P48754 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Brca1P48754 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Brca1P48754 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Brca1P48754 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.49■□□□□ 0.23
Brca1P48754 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Brca1P48754 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Brca1P48754 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Brca1P48754 Gm42693-201ENSMUST00000196779 631 ntBASIC16.49■□□□□ 0.23
Brca1P48754 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Brca1P48754 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Brca1P48754 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16.49■□□□□ 0.23
Brca1P48754 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Brca1P48754 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Brca1P48754 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Brca1P48754 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Brca1P48754 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Brca1P48754 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Brca1P48754 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Brca1P48754 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Brca1P48754 Gm5912-201ENSMUST00000122282 1438 ntBASIC16.48■□□□□ 0.23
Brca1P48754 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Brca1P48754 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.48■□□□□ 0.23
Brca1P48754 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.48■□□□□ 0.23
Brca1P48754 Gm14660-201ENSMUST00000119809 575 ntBASIC16.48■□□□□ 0.23
Brca1P48754 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Brca1P48754 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC16.48■□□□□ 0.23
Brca1P48754 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.48■□□□□ 0.23
Brca1P48754 Gm37424-201ENSMUST00000191727 561 ntBASIC16.48■□□□□ 0.23
Brca1P48754 Gm5279-201ENSMUST00000199575 745 ntBASIC16.48■□□□□ 0.23
Brca1P48754 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.48■□□□□ 0.23
Brca1P48754 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Brca1P48754 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.48■□□□□ 0.23
Brca1P48754 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Brca1P48754 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Brca1P48754 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC16.48■□□□□ 0.23
Brca1P48754 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Brca1P48754 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.48■□□□□ 0.23
Brca1P48754 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Brca1P48754 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Brca1P48754 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Brca1P48754 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Brca1P48754 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Brca1P48754 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Brca1P48754 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Brca1P48754 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Brca1P48754 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Brca1P48754 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Brca1P48754 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC16.47■□□□□ 0.23
Brca1P48754 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC16.47■□□□□ 0.23
Brca1P48754 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Brca1P48754 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Brca1P48754 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Brca1P48754 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Brca1P48754 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.47■□□□□ 0.23
Brca1P48754 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.47■□□□□ 0.23
Brca1P48754 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Brca1P48754 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC16.47■□□□□ 0.23
Brca1P48754 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.47■□□□□ 0.23
Brca1P48754 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Brca1P48754 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC16.47■□□□□ 0.23
Brca1P48754 AC153872.1-201ENSMUST00000199539 128 ntBASIC16.47■□□□□ 0.23
Brca1P48754 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Brca1P48754 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.47■□□□□ 0.23
Brca1P48754 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Brca1P48754 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Brca1P48754 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Brca1P48754 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Brca1P48754 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Brca1P48754 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Brca1P48754 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Brca1P48754 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Brca1P48754 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms