Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prox1P48437 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prox1P48437 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prox1P48437 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prox1P48437 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Prox1P48437 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prox1P48437 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prox1P48437 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.35□□□□□ -0.11
Prox1P48437 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prox1P48437 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prox1P48437 Gm9172-201ENSMUST00000212092 954 ntBASIC14.35□□□□□ -0.11
Prox1P48437 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.35□□□□□ -0.11
Prox1P48437 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prox1P48437 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prox1P48437 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.35□□□□□ -0.11
Prox1P48437 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prox1P48437 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prox1P48437 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prox1P48437 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prox1P48437 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.35□□□□□ -0.11
Prox1P48437 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prox1P48437 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prox1P48437 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prox1P48437 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prox1P48437 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Prox1P48437 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prox1P48437 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prox1P48437 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prox1P48437 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prox1P48437 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prox1P48437 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prox1P48437 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prox1P48437 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Prox1P48437 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prox1P48437 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prox1P48437 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Prox1P48437 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Prox1P48437 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prox1P48437 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Prox1P48437 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.34□□□□□ -0.11
Prox1P48437 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Prox1P48437 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.34□□□□□ -0.11
Prox1P48437 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.34□□□□□ -0.11
Prox1P48437 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.34□□□□□ -0.11
Prox1P48437 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prox1P48437 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Prox1P48437 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.34□□□□□ -0.11
Prox1P48437 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.34□□□□□ -0.11
Prox1P48437 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prox1P48437 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prox1P48437 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prox1P48437 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.34□□□□□ -0.11
Prox1P48437 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.34□□□□□ -0.11
Prox1P48437 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prox1P48437 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Prox1P48437 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prox1P48437 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Prox1P48437 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Prox1P48437 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prox1P48437 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prox1P48437 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prox1P48437 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prox1P48437 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prox1P48437 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.33□□□□□ -0.11
Prox1P48437 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Prox1P48437 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Prox1P48437 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Prox1P48437 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Prox1P48437 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prox1P48437 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prox1P48437 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Prox1P48437 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prox1P48437 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Prox1P48437 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prox1P48437 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.33□□□□□ -0.12
Prox1P48437 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.33□□□□□ -0.12
Prox1P48437 Ank2-226ENSMUST00000189368 339 ntBASIC14.33□□□□□ -0.12
Prox1P48437 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Prox1P48437 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prox1P48437 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prox1P48437 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prox1P48437 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prox1P48437 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Prox1P48437 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prox1P48437 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.33□□□□□ -0.12
Prox1P48437 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prox1P48437 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Prox1P48437 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Prox1P48437 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prox1P48437 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prox1P48437 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prox1P48437 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prox1P48437 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prox1P48437 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Prox1P48437 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prox1P48437 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prox1P48437 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Prox1P48437 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prox1P48437 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Prox1P48437 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms