Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Rfx3P48381 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfx3P48381 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfx3P48381 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfx3P48381 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfx3P48381 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfx3P48381 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.49□□□□□ -0.25
Rfx3P48381 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfx3P48381 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfx3P48381 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Rfx3P48381 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Rfx3P48381 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfx3P48381 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Rfx3P48381 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfx3P48381 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rfx3P48381 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfx3P48381 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rfx3P48381 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.49□□□□□ -0.25
Rfx3P48381 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rfx3P48381 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.49□□□□□ -0.25
Rfx3P48381 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.49□□□□□ -0.25
Rfx3P48381 Gm6296-201ENSMUST00000222599 943 ntBASIC13.49□□□□□ -0.25
Rfx3P48381 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfx3P48381 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfx3P48381 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfx3P48381 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rfx3P48381 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfx3P48381 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfx3P48381 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfx3P48381 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfx3P48381 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfx3P48381 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.48□□□□□ -0.25
Rfx3P48381 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfx3P48381 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Rfx3P48381 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Rfx3P48381 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfx3P48381 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Rfx3P48381 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Rfx3P48381 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfx3P48381 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfx3P48381 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Rfx3P48381 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.48□□□□□ -0.25
Rfx3P48381 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Rfx3P48381 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.48□□□□□ -0.25
Rfx3P48381 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfx3P48381 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfx3P48381 Gm11780-201ENSMUST00000136880 516 ntBASIC13.48□□□□□ -0.25
Rfx3P48381 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.48□□□□□ -0.25
Rfx3P48381 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfx3P48381 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.48□□□□□ -0.25
Rfx3P48381 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Rfx3P48381 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.48□□□□□ -0.25
Rfx3P48381 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfx3P48381 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfx3P48381 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfx3P48381 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfx3P48381 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfx3P48381 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Rfx3P48381 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfx3P48381 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfx3P48381 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfx3P48381 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Rfx3P48381 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Rfx3P48381 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfx3P48381 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Rfx3P48381 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rfx3P48381 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Rfx3P48381 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfx3P48381 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Rfx3P48381 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx3P48381 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx3P48381 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Rfx3P48381 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx3P48381 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx3P48381 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx3P48381 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx3P48381 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx3P48381 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx3P48381 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx3P48381 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Rfx3P48381 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx3P48381 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.47□□□□□ -0.25
Rfx3P48381 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx3P48381 Gm27459-201ENSMUST00000184860 107 ntBASIC13.47□□□□□ -0.25
Rfx3P48381 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.47□□□□□ -0.25
Rfx3P48381 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.47□□□□□ -0.25
Rfx3P48381 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx3P48381 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx3P48381 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx3P48381 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx3P48381 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Rfx3P48381 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx3P48381 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx3P48381 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx3P48381 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx3P48381 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx3P48381 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx3P48381 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx3P48381 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx3P48381 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms