Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-6P43688 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.12□□□□□ -0.15
Nkx2-6P43688 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-6P43688 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-6P43688 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-6P43688 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-6P43688 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Nkx2-6P43688 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-6P43688 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Nkx2-6P43688 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-6P43688 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Nkx2-6P43688 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Nkx2-6P43688 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-6P43688 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-6P43688 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Nkx2-6P43688 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-6P43688 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-6P43688 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-6P43688 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-6P43688 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-6P43688 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-6P43688 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-6P43688 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.11□□□□□ -0.15
Nkx2-6P43688 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-6P43688 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Nkx2-6P43688 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.11□□□□□ -0.15
Nkx2-6P43688 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-6P43688 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-6P43688 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-6P43688 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.11□□□□□ -0.15
Nkx2-6P43688 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-6P43688 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.11□□□□□ -0.15
Nkx2-6P43688 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-6P43688 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-6P43688 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.11□□□□□ -0.15
Nkx2-6P43688 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-6P43688 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.11□□□□□ -0.15
Nkx2-6P43688 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-6P43688 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
Nkx2-6P43688 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-6P43688 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-6P43688 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-6P43688 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-6P43688 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-6P43688 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-6P43688 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.1□□□□□ -0.15
Nkx2-6P43688 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-6P43688 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-6P43688 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-6P43688 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nkx2-6P43688 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-6P43688 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-6P43688 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-6P43688 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.1□□□□□ -0.15
Nkx2-6P43688 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.1□□□□□ -0.15
Nkx2-6P43688 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-6P43688 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.1□□□□□ -0.15
Nkx2-6P43688 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nkx2-6P43688 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-6P43688 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-6P43688 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-6P43688 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.1□□□□□ -0.15
Nkx2-6P43688 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-6P43688 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-6P43688 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-6P43688 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-6P43688 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Nkx2-6P43688 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nkx2-6P43688 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-6P43688 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-6P43688 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-6P43688 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-6P43688 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-6P43688 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-6P43688 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-6P43688 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-6P43688 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.09□□□□□ -0.15
Nkx2-6P43688 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.09□□□□□ -0.15
Nkx2-6P43688 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-6P43688 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.09□□□□□ -0.15
Nkx2-6P43688 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-6P43688 Gm20949-201ENSMUST00000206478 952 ntBASIC14.09□□□□□ -0.15
Nkx2-6P43688 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-6P43688 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-6P43688 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-6P43688 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-6P43688 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-6P43688 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Nkx2-6P43688 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.09□□□□□ -0.15
Nkx2-6P43688 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-6P43688 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-6P43688 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-6P43688 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-6P43688 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-6P43688 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-6P43688 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-6P43688 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-6P43688 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-6P43688 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-6P43688 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms