Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sdc2P43407 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sdc2P43407 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.75■□□□□ 0.27
Sdc2P43407 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sdc2P43407 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sdc2P43407 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sdc2P43407 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Sdc2P43407 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sdc2P43407 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.75■□□□□ 0.27
Sdc2P43407 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.75■□□□□ 0.27
Sdc2P43407 Gm9682-201ENSMUST00000197505 556 ntBASIC16.75■□□□□ 0.27
Sdc2P43407 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sdc2P43407 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sdc2P43407 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sdc2P43407 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sdc2P43407 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.75■□□□□ 0.27
Sdc2P43407 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sdc2P43407 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sdc2P43407 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sdc2P43407 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sdc2P43407 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sdc2P43407 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sdc2P43407 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sdc2P43407 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Sdc2P43407 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sdc2P43407 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sdc2P43407 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sdc2P43407 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Sdc2P43407 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sdc2P43407 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Sdc2P43407 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Sdc2P43407 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sdc2P43407 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Sdc2P43407 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Sdc2P43407 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Sdc2P43407 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sdc2P43407 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.74■□□□□ 0.27
Sdc2P43407 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.74■□□□□ 0.27
Sdc2P43407 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.74■□□□□ 0.27
Sdc2P43407 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Sdc2P43407 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sdc2P43407 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sdc2P43407 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.74■□□□□ 0.27
Sdc2P43407 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sdc2P43407 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Sdc2P43407 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sdc2P43407 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sdc2P43407 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.74■□□□□ 0.27
Sdc2P43407 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sdc2P43407 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sdc2P43407 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sdc2P43407 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sdc2P43407 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sdc2P43407 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Sdc2P43407 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Sdc2P43407 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sdc2P43407 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sdc2P43407 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sdc2P43407 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Sdc2P43407 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sdc2P43407 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.73■□□□□ 0.27
Sdc2P43407 Gm6376-201ENSMUST00000209407 580 ntBASIC16.73■□□□□ 0.27
Sdc2P43407 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Sdc2P43407 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.73■□□□□ 0.27
Sdc2P43407 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.73■□□□□ 0.27
Sdc2P43407 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sdc2P43407 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sdc2P43407 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.73■□□□□ 0.27
Sdc2P43407 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sdc2P43407 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Sdc2P43407 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sdc2P43407 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sdc2P43407 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sdc2P43407 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.73■□□□□ 0.27
Sdc2P43407 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sdc2P43407 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sdc2P43407 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sdc2P43407 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sdc2P43407 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sdc2P43407 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sdc2P43407 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Sdc2P43407 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sdc2P43407 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sdc2P43407 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sdc2P43407 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sdc2P43407 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sdc2P43407 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Sdc2P43407 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Sdc2P43407 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sdc2P43407 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sdc2P43407 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sdc2P43407 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.72■□□□□ 0.27
Sdc2P43407 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sdc2P43407 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sdc2P43407 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sdc2P43407 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sdc2P43407 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sdc2P43407 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sdc2P43407 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sdc2P43407 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms